Gene Nmar_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0343 
Symbol 
ID5774033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp306364 
End bp307248 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content40% 
IMG OID641315971 
Producthypothetical protein 
Protein accessionYP_001581677 
Protein GI161527851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC GTACGTCGTT CGCGCTACTA GCCGTTTTGA CTGCAGTCGG TACTTTAACC 
ATGTCAGCAG CATATGCAGA TGAAATTCCA CAAGCATGTG TTGGATGTAC CATGGCAGAT
GCAAGAGCAA CAGCAAATGA AATGTTGCGT GCAGATATCC CAGTATCTGT TTGGACAGAT
AAAACAGGGT ATGACCAAGG AGACATGATT TCAGTACAAG GGCAAGTAGC AAATGTAGCA
TCTGGATTTC CAGTTACAAT TACTGTTGTG AGTCCTCTAA ACTCAATCAT CACAGTTGAT
CAAATCGCTG TAACAGATGA GGGTAGTTTT GAGACAACAT TAAACACAGC AGGTGCAATG
TGGAAATACA GCGGTACCTA CACCATTAAA GCAAACTATG GCAGTGCTGA AAAGAGCAAT
AGTGTCAAAG TTCAATTAAT GGGAGGAGTT GCATATACAC CAACCTATGA AACACCACAA
AAGTCCAAAC AATGTGGAGC TAATGAGATT ACTGCAAATG GTTATTGTGT ACCATTTAGT
ATTTCAGGTG GTGCAGTTAC AAGTGCAACT CTCAATACAA ATGACAACTC AATTGTTGTC
AACATCAGCT CTACTGATGA TGGAACATTA ACTGTAACAC CATCAAAAAC AGTCCAAGAT
GGTATCTTCA TGGTACTAGT TGACGGAGAA GAATGGGATG ATGTTGAGAT TGTTGCAAAC
AAAGTAACAG TCATGTTCCC AGCAGGAACT GAACAAATTG AAATTATTGG TACCTTTGTA
GTCCCAGAGT TTGGCACAAT TGCAGCCATG ATTCTAGCAG TAGCAATTAT CTCAATAATT
GCAGTATCTG CAAAATCAAG ACTTAGCATT ATGCCAAGAT ACTAA
 
Protein sequence
MNSRTSFALL AVLTAVGTLT MSAAYADEIP QACVGCTMAD ARATANEMLR ADIPVSVWTD 
KTGYDQGDMI SVQGQVANVA SGFPVTITVV SPLNSIITVD QIAVTDEGSF ETTLNTAGAM
WKYSGTYTIK ANYGSAEKSN SVKVQLMGGV AYTPTYETPQ KSKQCGANEI TANGYCVPFS
ISGGAVTSAT LNTNDNSIVV NISSTDDGTL TVTPSKTVQD GIFMVLVDGE EWDDVEIVAN
KVTVMFPAGT EQIEIIGTFV VPEFGTIAAM ILAVAIISII AVSAKSRLSI MPRY