Gene Nmar_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0308 
Symbol 
ID5773727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp272261 
End bp272569 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content37% 
IMG OID641315935 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001581642 
Protein GI161527816 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.359094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA TTATTGCAGG AAAAATATCA GATATTCCTC CTGGAAAAAT GATCAAGGTA 
TCTATTGACG GAAGAGACAT ACTCGTTGCA AATATCGACG GAGAGTATTG TGCAACAGAT
GACTCGTGTA CTCATTCTGG TGCAAGTCTT TCAGAGGGAA AATTAGACGG CTGTGTTGTT
ACATGTGGAT GGCATGCTGC AGAGTTTGAT TGTAAAACAG GAAAACTAGT AAAATTTCCA
GCAAAAATTA GAGATTTAAC ATCATACAAC GTGACAGTTG AATCAGATAG CGTATTTGTA
GAGATGTAA
 
Protein sequence
MGKIIAGKIS DIPPGKMIKV SIDGRDILVA NIDGEYCATD DSCTHSGASL SEGKLDGCVV 
TCGWHAAEFD CKTGKLVKFP AKIRDLTSYN VTVESDSVFV EM