| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0258 |
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| Symbol | |
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| ID | 5773361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 227624 |
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| End bp | 229336 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641315881 |
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| Product | succinate dehydrogenase or fumarate reductase flavoprotein subunit |
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| Protein accession | YP_001581592 |
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| Protein GI | 161527766 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.408248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATT CAATTGAGTT TGATTTGATA ATTTGTGGTT CTGGCTTAGC TGGTCTTAGG
GCAGCAATTG CAGCTGCGAA AAAAGGACCT AATCTGAAAA TTGGTATTGT ATCAAAATTA
CAAGTAATGC GTTCTCACTC TGTTTCTGCA GAAGGTGGAA CTGCTGCAGT TATTCAAGAA
GATGCAGGTG ATACCATTGA ATCCCATGTT TATGATACTG TAAAGGGCAG TGACTTTCTT
GCAGACCAAG ATGTTGCTGA AAGACTTTGT GTTGAGATGC CACAAGAAAT CCATCAGTTA
GATCATTGGG GCATGCCATG GTCTAGAAAA GATGATGGAA GAATTGATCA GCGAAACTTT
GGTGGTTATA GTTTTCCAAG AGCAACTTAT GCATCTGACA AAGTTGGTTT CTTTGAAATG
CAAACATTGT ATGACACATG TCAAAAACAT GAAAATATAG AATATCTTAA CGAATGGTTT
GCAACATCTA TTGTTCATGA TGGTAAAAAA TTCATGGGTC TTACGGCAAT TGAATTAGGT
TCTGGAACAT TTTACACAAT CAAAGGTAAA GCTCTCATCA TTGCAACTGG TGGTGCTGGA
AGATTGTACA GTTTTTCAAC TTATGCTTTA TCATCAACAC CTGATGGTTT AGACATGGGA
TTGCGTGCCG GTATGGCACT AAAAGATATG GAGTTTGTAC AATTTCATCC TACTGGTATC
TTGCCATCTG GTATTTTGAT CACTGAAGGT GCAAGAGGAG AAGGTGGTTA TCTTCTTAAC
AACAAAGGTG AAAGATTCAT GAAAACTTAT GCAGCTGGAA AAATGGAATT AGCTCCACGT
GATATTGTTT CTCGTTCTAT TATGACAGAA ATTCAAGAAG GTCGTGGTTT CAAACATGAA
ACAGGAGTTG ATTGTATGAA ACTTGATTTG AGACATCTTG GTGATGAAAA AATCAAAGAA
AAGTTAGGTG GAATTAGAGA AATTTCTATC AAATTCTCAG GAATTGATCC TGCTGAAGAA
TTACTTGACA TTAGACCTGT TTGCCATTAC ATGATGGGTG GGCTTCATAC TGATATTGAT
GGAGCAACAG AAATCCAAGG AGTTTGGGCT GCAGGTGAGG CTGCATGTAA CAGTGTTCAT
GGCTCAAACA GACTAGGTGC AAACTCTACC TCTGAGTGCA TTGTTTGGGG TAAAATCACA
GGTGAACTTG CAGCTGAGTA TGCTATGAAA AACACAACTG CAGATCAATG GCCACATCAC
TTGGTTGCAG CAGAAGAAAA GAGAATCTAT GATGGCATCT TTAGAGGAAA TGGTGATGCA
AATCCATATG AAATTAGACA AGAGTTAACT GATGTCATGA ATGACAAAGC ATATGTTTAC
AGAAACGAAA CTGATCTTGT TGCAGGTCTT AAGAGAATTC GTGAACTAAA AGCACAAACT
TGGAAACATG TTGATGATAA AGCAAAAGAG TACAACACTA ACTTTTCAAA TGTTATGGAA
CTTGATTCTA TGTTCAGAGT AGCTGAAATT GTATTAATTG GTGCAATTAA TAGAAAAGAA
TCTCGTGGTG CTCATGCAAG AACTGATTAT ACTAAAAGAG ATGATGCAAA CTTTTTGCAT
CACACATTAG CATATTATGA TCCAAATGAA CCAATCATGA AGACGCATCC AGTGACAATC
ACTAAGTATC AGCCTGTGGA GAGGAAATAC TAG
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| Protein sequence | MVDSIEFDLI ICGSGLAGLR AAIAAAKKGP NLKIGIVSKL QVMRSHSVSA EGGTAAVIQE
DAGDTIESHV YDTVKGSDFL ADQDVAERLC VEMPQEIHQL DHWGMPWSRK DDGRIDQRNF
GGYSFPRATY ASDKVGFFEM QTLYDTCQKH ENIEYLNEWF ATSIVHDGKK FMGLTAIELG
SGTFYTIKGK ALIIATGGAG RLYSFSTYAL SSTPDGLDMG LRAGMALKDM EFVQFHPTGI
LPSGILITEG ARGEGGYLLN NKGERFMKTY AAGKMELAPR DIVSRSIMTE IQEGRGFKHE
TGVDCMKLDL RHLGDEKIKE KLGGIREISI KFSGIDPAEE LLDIRPVCHY MMGGLHTDID
GATEIQGVWA AGEAACNSVH GSNRLGANST SECIVWGKIT GELAAEYAMK NTTADQWPHH
LVAAEEKRIY DGIFRGNGDA NPYEIRQELT DVMNDKAYVY RNETDLVAGL KRIRELKAQT
WKHVDDKAKE YNTNFSNVME LDSMFRVAEI VLIGAINRKE SRGAHARTDY TKRDDANFLH
HTLAYYDPNE PIMKTHPVTI TKYQPVERKY
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