Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0256 |
Symbol | |
ID | 5773441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 225951 |
End bp | 226817 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641315879 |
Product | putative methylisocitrate lyase |
Protein accession | YP_001581590 |
Protein GI | 161527764 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02319] carboxyvinyl-carboxyphosphonate phosphorylmutase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.764901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT TACGTAGTAT GCTAAAATCT AACAAGCCTT TGATTATTCC TGGAGTTTAT GATGCAATTG GTGCAAAAAT TGCAGAGAAG GTTGGATTTG ATGCAATGTT TCAAACAGGA TATGGTACAT CAGCTACTCT CTTTGGAATG CCAGATTATG GATTCATAGG TGCAACAGAA ACAGTTGACA ATGCAAGGAG AATTTGTAGA GCAGTTAAAG TTCCTGTAAT AGTAGATTCA GACACAGGTT ATGGAAATGC ACTAAGTGTG TGGAAGCTTG TAAAAGAATT AGAATCTGCA GGGGCATCAG GAATTTTTCT AGAAGATCAA AGATGGCCAA AAAGATGCGG ACACATGCAA GGAAAAGAAG TTGTGTCACA AGAAGAATAT ACTGAAAAGC TTGGTGCAGC AATTGATGCA AGAGAAAGTA AAGATTTCAT AATTGTTGCA AGAACAGATG CAAGAGCAAC AGAAGGACTG GATGCAGCAA TAGAAAGAGG ATTACAAAAT AAAAAAACAG GTGCAGATGC AGTATTTGTT GAAGCACCAA GATCAATTGA AGAGATGAAA CAGATTGGAA AGTCAATTAA GGCACCACTA GTTGCAAACA TGATTGAAGG AGGAGCAACT CCAATAAGTT CAGCACAAGA CTTGCACAAA ATGGGATTCA AAATAATTTT GTACCCGTTA TCAGTATTGT TTGCAAATAC TTTTGCCACA ATGAACATAC TTCAAGAATT AAAGAAAACA GGAACGACTT CCAAATACAA AAACAAAGTA GTTAATTTTG ATCAATTCAA TGATCTTGTA GAACTTTCAA AATTCAGGAA GATGGAAAAG AAGTACGGAT TTTCAAAAAG AGAATAA
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Protein sequence | MKNLRSMLKS NKPLIIPGVY DAIGAKIAEK VGFDAMFQTG YGTSATLFGM PDYGFIGATE TVDNARRICR AVKVPVIVDS DTGYGNALSV WKLVKELESA GASGIFLEDQ RWPKRCGHMQ GKEVVSQEEY TEKLGAAIDA RESKDFIIVA RTDARATEGL DAAIERGLQN KKTGADAVFV EAPRSIEEMK QIGKSIKAPL VANMIEGGAT PISSAQDLHK MGFKIILYPL SVLFANTFAT MNILQELKKT GTTSKYKNKV VNFDQFNDLV ELSKFRKMEK KYGFSKRE
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