Gene Nmar_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0256 
Symbol 
ID5773441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp225951 
End bp226817 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content35% 
IMG OID641315879 
Productputative methylisocitrate lyase 
Protein accessionYP_001581590 
Protein GI161527764 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02319] carboxyvinyl-carboxyphosphonate phosphorylmutase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.764901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TACGTAGTAT GCTAAAATCT AACAAGCCTT TGATTATTCC TGGAGTTTAT 
GATGCAATTG GTGCAAAAAT TGCAGAGAAG GTTGGATTTG ATGCAATGTT TCAAACAGGA
TATGGTACAT CAGCTACTCT CTTTGGAATG CCAGATTATG GATTCATAGG TGCAACAGAA
ACAGTTGACA ATGCAAGGAG AATTTGTAGA GCAGTTAAAG TTCCTGTAAT AGTAGATTCA
GACACAGGTT ATGGAAATGC ACTAAGTGTG TGGAAGCTTG TAAAAGAATT AGAATCTGCA
GGGGCATCAG GAATTTTTCT AGAAGATCAA AGATGGCCAA AAAGATGCGG ACACATGCAA
GGAAAAGAAG TTGTGTCACA AGAAGAATAT ACTGAAAAGC TTGGTGCAGC AATTGATGCA
AGAGAAAGTA AAGATTTCAT AATTGTTGCA AGAACAGATG CAAGAGCAAC AGAAGGACTG
GATGCAGCAA TAGAAAGAGG ATTACAAAAT AAAAAAACAG GTGCAGATGC AGTATTTGTT
GAAGCACCAA GATCAATTGA AGAGATGAAA CAGATTGGAA AGTCAATTAA GGCACCACTA
GTTGCAAACA TGATTGAAGG AGGAGCAACT CCAATAAGTT CAGCACAAGA CTTGCACAAA
ATGGGATTCA AAATAATTTT GTACCCGTTA TCAGTATTGT TTGCAAATAC TTTTGCCACA
ATGAACATAC TTCAAGAATT AAAGAAAACA GGAACGACTT CCAAATACAA AAACAAAGTA
GTTAATTTTG ATCAATTCAA TGATCTTGTA GAACTTTCAA AATTCAGGAA GATGGAAAAG
AAGTACGGAT TTTCAAAAAG AGAATAA
 
Protein sequence
MKNLRSMLKS NKPLIIPGVY DAIGAKIAEK VGFDAMFQTG YGTSATLFGM PDYGFIGATE 
TVDNARRICR AVKVPVIVDS DTGYGNALSV WKLVKELESA GASGIFLEDQ RWPKRCGHMQ
GKEVVSQEEY TEKLGAAIDA RESKDFIIVA RTDARATEGL DAAIERGLQN KKTGADAVFV
EAPRSIEEMK QIGKSIKAPL VANMIEGGAT PISSAQDLHK MGFKIILYPL SVLFANTFAT
MNILQELKKT GTTSKYKNKV VNFDQFNDLV ELSKFRKMEK KYGFSKRE