Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0248 |
Symbol | |
ID | 5773978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 219583 |
End bp | 220500 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641315870 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001581582 |
Protein GI | 161527756 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTC CACTTTCAAA ATATGTTTGG TTTGATGGAA AATATGTTCT AACAGAAAAA GCACAAGTTC CAATCACAAC ACATGCAATA CATTATGGAA CATCTATCTT TGAGGGAATT AGAGCATATT GGAATGGAAA AAATCTTCAT GTGTTTAGAT TAGATGAACA TGTAAAACGA TTTAGAAGAT CAGGACAGTT TTACAATATT TCATTAAACT TTTCAGACAA AGAAATTACA GAAGCAATAA TTGGAATATG CAAAAAAAAT AAAATCAAAA AATCATGTTA TATTAGACCA TTTTATTTTG TAGGAGATTA CGGAATAAAT CTTCACGTTA CTGAAAAAGC TCCAACAAAT GTTGCAATGT TTACGTTTCC TTTTGGGGAT TTATTTAACA AGAATGGTAT CTCTGCAGGA ATTGTCTCAT GGAGAAAATT CTCAGACATG TCAACTCCGC CTCAAGCAAA GATGGGTGGA AATTATCTAA ATTCAATCAT TGCAACACAA GAAGCAAAAA GAAACGGAGT AGATGAAGCA ATATTACTTG ATCATAACGG AAATGTAAGT GAAGCACCTG GTGAGAATAT CTTTATTGTT AGAGAGGGTC AGATGGCAAC ACCATCATTA GCATCAGCTG CACTAGAAGG AATTACTCGC GATGCAGTTA TTAAAATTGC AAGAGATCTG GATATTGAAA TAGTTGAAAG AGACATTACA CGTAGTGAGC TTGCAATGTC TGATGAGGTA TTTTTAACAG GAACTGCAGC TGAGATCACA CCCATAATTT CACTTGATGG AAAGAAAGTC AGTAATGGCA AACCTGGAGA CATTACAAAG AAGATGATGG AAGAATATAC AGACATTGTA ATGAACAAAA ATGACGACTA TTCTCATTGG TTAACTGCGG TGTATTAG
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Protein sequence | MKLPLSKYVW FDGKYVLTEK AQVPITTHAI HYGTSIFEGI RAYWNGKNLH VFRLDEHVKR FRRSGQFYNI SLNFSDKEIT EAIIGICKKN KIKKSCYIRP FYFVGDYGIN LHVTEKAPTN VAMFTFPFGD LFNKNGISAG IVSWRKFSDM STPPQAKMGG NYLNSIIATQ EAKRNGVDEA ILLDHNGNVS EAPGENIFIV REGQMATPSL ASAALEGITR DAVIKIARDL DIEIVERDIT RSELAMSDEV FLTGTAAEIT PIISLDGKKV SNGKPGDITK KMMEEYTDIV MNKNDDYSHW LTAVY
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