Gene Nmar_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0216 
Symbol 
ID5774556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp192965 
End bp193582 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content29% 
IMG OID641315836 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001581550 
Protein GI161527724 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT TTCAATTTTT AGATTCAGAT GGAATAGAAT TAGTTAAGAT GGCAAGAAAA 
GTTGTAATTG AATTTTTAAA AAATAATTCT AAAATTATTG ATTCAGAATT TGATTCAAAA 
TTTAATTTTA GTTCAGGGGT TTTTGTTACA ATAAACAAAG AAAATGATCT AAGAGGGTGT 
ATTGGATATC CAACTCCAGT AAAGAAATTA TGTGATGGGT TAGTTGATGC TGCAATTTCA 
GCTGCTACAA AAGATCCAAG ATTTACTCCA GTAACTATTG ATGAATTAGA CAAGATAACA 
TTTGAAGTAA CTGTTCTTAC ACCTCCTGAA GAAATCAAAG TAGAAGAATA TTCAGAGTAT 
CTATCAGAAA TCAAAGTTGG TAGAGATGGA TTAATTGTGG AAAATAGTTT TTCATCAGGA 
TTGTTATTGC CACAAGTTCC CACAGAATAT GGATGGAATG AAAAAGAATT CTTAGAATAT 
ACATGTCAAA AAGCAGGATT AAACAAAGAT GCATGGAAAG AAAAATCAAC AACAATTTTA 
AAATTTCAAG GAGTTATTTT CAAAGAAGAA AAACCCAATG GGAATATTCT TAGAGAATCA 
CCTAATGGTC TTTTATAA
 
Protein sequence
MTNFQFLDSD GIELVKMARK VVIEFLKNNS KIIDSEFDSK FNFSSGVFVT INKENDLRGC 
IGYPTPVKKL CDGLVDAAIS AATKDPRFTP VTIDELDKIT FEVTVLTPPE EIKVEEYSEY 
LSEIKVGRDG LIVENSFSSG LLLPQVPTEY GWNEKEFLEY TCQKAGLNKD AWKEKSTTIL 
KFQGVIFKEE KPNGNILRES PNGLL