Gene Nmar_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0127 
Symbol 
ID5774338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp117608 
End bp119311 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content34% 
IMG OID641315747 
Productcarbamoyltransferase 
Protein accessionYP_001581465 
Protein GI161527639 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000000790061 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTACAATC TTGGAATATC CTGTTATTAT CATGATTCGG CTGCAGCATT ACTCAAAGAC 
GGTCATGTAG TTGCAGCAGT TGAAGAAGAA CGATTCTCTA GAAAAAAATT TGATGATGAT
TTTCCAAATA TGGCAATAGA GTGGTGTCTT AATGAGGCAG ACATATCTCC CTCTGAGATT
CATTCTGTAG CGTTTTATGA CAAACCAATT TTAAAATTTG AAAGATTACT TGATAATTAC
ATTACATTCG CACCAAGAGG TCTCTTTAGT TTTATTAATA CTATACCAAA ATGGTTACAC
AAAAGACTGT GGATAAAAAA TGACATAAAC AAAGCACTCA ATGGATTTAA GGGTGAAATT
ATTTTCCCTG ATCACCATAT GTCCCATGCA TCTCATACAT TTTATACATC ACAATTTGAT
GAATCTGCAA TATTAACTGT GGATGGAGTA GGTGAATGGA GCACAACATC ATTTGGTCAT
GCCACAGACA ATTCTATTAC ATTGACTCAT GATATCCGAT GGCCTAATTC ATTAGGATTG
TTTTATTCAG CATTCACTTA CTTTCTAGGT TTTCAGGTAA ATGAGGGTGA GTACAAACTC
ATGGGTCTCG CATCTTATGG AAAACCTAAG TACTATGATA CAATTTTAAA CAATTTGATT
GATGTTAAAG ATGATGGTTC AATTCATCTT GATATGAAAT ATTTTGCATT TACGTATGAC
AAGGTAATGA CAAATCAAAA ATTTTCAAAA TTATTTGGAA TCAATCCTAG AAAGAAAAAT
GAAAAAACAG AACAAATACA CTATGACATT GGTGCTAGTG TACAAAAGGT ATTGGAGGAT
ATTTTGTTAA AGATGACACA TCACGTGTAT GAGAAAACAA ATTCAAAAAA TTTGTGTCTT
GGAGGAGGCG TAGCTCTTAA TGGTGTCGCA AATTATCGTA TTCTTAGAGA AGGACCGTTT
GATAATTTAC ACATACCCCC ATCCCCGGGA GATGCAGGTA GTGCAATTGG CTGTGCGCAG
TATCTTTACT ACATTCACCA CAAAAAAACC AGATTAATTG AAAATGACTC CTCTAAGATA
ATTTCAGAAA ACGCTTATGT TGGACCATCG TATTCAAATG AACAGATAGT AGAATTTTTA
GATTCTATGA ATATCTCTTA TGAGAAATTA GAATGTGATG AATTACTAAA AAAAACAGCT
CGGCTTATCT CTGATGGAAA AATTGTTGGT TGGTATCAGG GTAAAATGGA ATGGGGTCCA
AGAGCTTTGG GATGTAGAAG TATTCTGGCT GATCCTAGAA AATCAGAGAT GAAGGATGTT
CTAAATGAAA AGATCAAACA CAGAGAATCA TTTAGACCAT TTGCCCCATC AATACTTGAA
GAATATACTT CAGAATATTT CGAAATTGAC AGAATTAGCC CTTACATGTT GTTTGTTGCT
CCTGTTAAGA AACCACAAGA TATTCCAGCA GTGACACATG TTGATGGTAC TGGTAGATTA
CAAACTGTAA ATCGTGATGC TAATCCACTT TACTATAACT TGATTTTAGA ATTTTATAAA
ATCACTGGGG TTCCAGTAAT TATTAATACA TCCATGAATG TCATGGGGGA GCCAATTGTC
AATACTCCTG AACAGGCTTA CAATATGATT ACCAAAACAA ATATGGATTT TATTGTTTTG
GGGAATAATT TGGTGGAAAA GTAA
 
Protein sequence
MYNLGISCYY HDSAAALLKD GHVVAAVEEE RFSRKKFDDD FPNMAIEWCL NEADISPSEI 
HSVAFYDKPI LKFERLLDNY ITFAPRGLFS FINTIPKWLH KRLWIKNDIN KALNGFKGEI
IFPDHHMSHA SHTFYTSQFD ESAILTVDGV GEWSTTSFGH ATDNSITLTH DIRWPNSLGL
FYSAFTYFLG FQVNEGEYKL MGLASYGKPK YYDTILNNLI DVKDDGSIHL DMKYFAFTYD
KVMTNQKFSK LFGINPRKKN EKTEQIHYDI GASVQKVLED ILLKMTHHVY EKTNSKNLCL
GGGVALNGVA NYRILREGPF DNLHIPPSPG DAGSAIGCAQ YLYYIHHKKT RLIENDSSKI
ISENAYVGPS YSNEQIVEFL DSMNISYEKL ECDELLKKTA RLISDGKIVG WYQGKMEWGP
RALGCRSILA DPRKSEMKDV LNEKIKHRES FRPFAPSILE EYTSEYFEID RISPYMLFVA
PVKKPQDIPA VTHVDGTGRL QTVNRDANPL YYNLILEFYK ITGVPVIINT SMNVMGEPIV
NTPEQAYNMI TKTNMDFIVL GNNLVEK