Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0083 |
Symbol | |
ID | 5774240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 70282 |
End bp | 71367 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641315701 |
Product | cobalamin biosynthesis protein CbiD |
Protein accession | YP_001581421 |
Protein GI | 161527595 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.25516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGAAG AGAAAAAACT CAGAACAGGG TACACAACAG GGAGTTCTGC CACTGCAGCA TCAAAAGCGG CTTTATTATC AATTATCAAA CAACAAAAAA TTGAAGAGGT TGAAATTACC TTACCTAAGA AAACCACCAT TAAGATTCCT GTAAATTCAT GTGAATTTGA AAAAAACAAA GCAAAATGCT CTGTAATAAA AGATGGGGGA GACGATCCCG ATGTCACACA TGGTGCTGAA ATTATAGTTG AATTAACATT TAATGAAAAC AAAAAGCAAA TTGAAATTGA TGGGGGAGAA GGAGTAGGCA TAGTTACTAA ACCTGGTTTA GGTTTAGAAA TTAACAAACC AGCCATAAAT CCTGTTCCAA AAAAAATGAT TACAGAAAAT CTTCAAGAAA TAGGCAGCGA TATTCTGCAT AAAAAAGGAA TTAGAGTTGA AATATCAGTT CCAAAAGGTA AAGAATTAGG ACCTAAAACG GATAATCCTA GAATAGGCAT CAAAGAAGGA ATTTCAATTT TAGGTACAAG TGGAATAGTA ATCCCATTTT CAACTGCATC ATATGCAGCA TCCATTAGAC AAAACTTGGA TGTATCAATT GCTATGGGAA ATGATACAGT AGTATTAACA ACTGGAGGAA GAAGTGAAGA CTTTGCAAAA AAGATCGTAG ATCTTCCAGA ACATTGTTTT GTACAAATGG GGGATTTTTC AGGTTACACA ATTCAACAAT GCGGTAGGAA AAATATCAAA AAGGCATACG TGGTTGGATT TATTGGAAAA CTGGCAAAGA TGGCAGCAGG AGTAAAACAA ACTCATGTTA AAGGTTCCAA AGTTGATATG AACTTTCTAG CAGAATTGGC AAGAAAAGTC AACGCAGATA AAAAAATTAT TGATGATATT AAAAAAGCGA ATACTGCAAG ACATGTTTCA GAAATTATAC AAGAAAATAA TGTGAGTGGA TTTTTTGAGT TAATTTGCGC TGAAGTGTAT AAACATATGA GAAAGCACAG TGAAGAAAAA GTTCCGATTG ATGTCATATT ATTTGATTTT GAGGGAAACA TTTTGGCAAG AGAACCAAAA GGGTAA
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Protein sequence | MAEEKKLRTG YTTGSSATAA SKAALLSIIK QQKIEEVEIT LPKKTTIKIP VNSCEFEKNK AKCSVIKDGG DDPDVTHGAE IIVELTFNEN KKQIEIDGGE GVGIVTKPGL GLEINKPAIN PVPKKMITEN LQEIGSDILH KKGIRVEISV PKGKELGPKT DNPRIGIKEG ISILGTSGIV IPFSTASYAA SIRQNLDVSI AMGNDTVVLT TGGRSEDFAK KIVDLPEHCF VQMGDFSGYT IQQCGRKNIK KAYVVGFIGK LAKMAAGVKQ THVKGSKVDM NFLAELARKV NADKKIIDDI KKANTARHVS EIIQENNVSG FFELICAEVY KHMRKHSEEK VPIDVILFDF EGNILAREPK G
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