Gene Nmar_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0071 
Symbol 
ID5773031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp60101 
End bp60514 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content36% 
IMG OID641315689 
Product30S ribosomal protein S6e 
Protein accessionYP_001581409 
Protein GI161527583 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAACT TCAAGATTAC CATTTCCGAT ACCAAAGGAA AATCAATGTC TAAAGAGCTT 
AAAGATAGCG ATGCTAATCC TCTCTTAGGA CTTGAATTAG GACAAGAAAC TGATGCTTCT
GTTGTAGGTC TAAATGGAAA GTTAAAACTT ACTGGAGGTA GTGACAAGTC TGGTGTTCCA
ATGAGAAATG ATATTCATGG TGCTGCAAGA AAATACGTTT TGCTTTCTAA AGGTGTAGGT
TTACAAGATG CAGAGAAAGG ACAAAGAGTA AGAAAATTAA TGCGTGGAAA CACTGTTTCT
GAAGAAATTT ATCAAATTAA TTGCAAATTT GATGGTGAAT TACCTGTTGA AGAAGCTCCT
GCAGAAGACG CACCAGAATC TGCAGAAGAA AAATCTGAAG ATAAAAAAGA ATAA
 
Protein sequence
MANFKITISD TKGKSMSKEL KDSDANPLLG LELGQETDAS VVGLNGKLKL TGGSDKSGVP 
MRNDIHGAAR KYVLLSKGVG LQDAEKGQRV RKLMRGNTVS EEIYQINCKF DGELPVEEAP
AEDAPESAEE KSEDKKE