Gene Nmar_0061 details

Gene Information

• Locus tag: Nmar_0061
• ID: 5773993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 48580
• End bp: 49230
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641315678
• Product: hypothetical protein
• Protein accession: YP_001581399
• Protein GI: 161527573
• COG category: [N] Cell motility
• COG ID: [COG5491] Conserved protein implicated in secretion

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCAAACT TCGACAAGAC TTGGGCTCGA CAAGAGACCC AAAGCGTAAC TGGCAAACTC 
CGAGAAGCAG TAAAGCCTCA AGGTGCATTA AAACCACGAA TCCAAACTGC AGTAAACAAA 
CTACAAGTCC AAATTTCAAA GATGGACTCT ATGTTAGGAA AACTGCACGA AAGAGATGCG 
CAACTCTTTC AGAGAGTCGT GACTGCAATG CAGCAACATG ATACTAGCAC AAGTAGAGTT 
TTGTCTAACG AATTAGCTGA AATTCGTAAG GTTACAAAGA TGCTCGGCAA CGCAAGAATG 
TCATTAGAAC AAGTCCAACT AAGACTCACA ACTATTCATG ATCTTGGTGA CGCTATGGTG 
GCAATCGGAC CAGCAATGTC TACAATGAAG GGATTGAAGT CATCGCTAGG AAGATTCATG 
CCAGAAGCAG ACTCAGAATT GAATACCATG ACCCAGACAC TCAATGGACT TATGATGGAT 
TCACTTGCAG GAGACTCATT TAACATGGAG TCAGACGTTT CTAGTGAAGA AACAGAGAAG 
ATCCTACAAG AAGCATCTGC AGTAGCTGAA CAACAGATTG GTGATAAGTT CCCATCTGTA 
CCTTCCTCAA CTGGACTTTC GTCAGGAACC TCTACTTCTA CCTTCGAGTA G 

 

Protein sequence

MPNFDKTWAR QETQSVTGKL REAVKPQGAL KPRIQTAVNK LQVQISKMDS MLGKLHERDA 
QLFQRVVTAM QQHDTSTSRV LSNELAEIRK VTKMLGNARM SLEQVQLRLT TIHDLGDAMV 
AIGPAMSTMK GLKSSLGRFM PEADSELNTM TQTLNGLMMD SLAGDSFNME SDVSSEETEK 
ILQEASAVAE QQIGDKFPSV PSSTGLSSGT STSTFE