Gene Nmar_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0056 
Symbol 
ID5773004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp45126 
End bp45602 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content36% 
IMG OID641315673 
Producthypothetical protein 
Protein accessionYP_001581394 
Protein GI161527568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAAT TCAAAAAGAA GAAATCAAAA CCTACACCTG AGCCTGAGGA CTCTAAGAAG 
GAAACTCCTC AAGAAGAGCC AGTTGATATT CCTGAAATAG AAAAATCTGA ACCAGCTCCT
GAACCATCAA AAGAACCTCA GATGAGTGAG GCTGAAAAAA GTGACAAGGA TAGAAAATTA
AACAAATTAT TTTGGATGCG TGTTGCTCTT GCAGTTATTG CAGGTACTGC AGCTACTTTC
ATCTTTGAAG ATATTGAAGG CGAGGATAGA CGATGGGCAT CCATTGGATT TATGATTATA
GTATTCTTTG CAACAATTAT TGTAGCTAAA GGAATGAAGA TGCAATTACC ATCATCAGAC
AGAAAGAAAA TTGTTACACA AGCAATTGGT AGCTATGTTT TCTTGTACTT GTTTACTTGG
ATTGTAACCT ATACTCTAGT TCATTCTGGA AATATTTCTA CTGGAATTAA CATCTAG
 
Protein sequence
MAKFKKKKSK PTPEPEDSKK ETPQEEPVDI PEIEKSEPAP EPSKEPQMSE AEKSDKDRKL 
NKLFWMRVAL AVIAGTAATF IFEDIEGEDR RWASIGFMII VFFATIIVAK GMKMQLPSSD
RKKIVTQAIG SYVFLYLFTW IVTYTLVHSG NISTGINI