Gene Nmar_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0047 
Symbol 
ID5773481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp35839 
End bp37074 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content34% 
IMG OID641315664 
Producthypothetical protein 
Protein accessionYP_001581385 
Protein GI161527559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCAAAA TAGGAGAATT CATCTACCCA TGGGGAAGTG GTCACTATTC AAGAATGATG 
AGGTTAAATG AAGTTCTTGG AGATCACATC AAAGAAGACT TTGAGGTTCA TTTCTCCAGC
AAAGACCACG TATACGAAAA ATTGTTGAAA AAATTTCCAG ATGAAAGAGA GAAAATTCAT
GAAATTTTAA TGCCAACTCC TATTGATGGA AAGTTTGGTC CAAGTGTTTC AATGTCATTA
ATGAATTTGC TATTACCAAT TTCAAAGAAT CCACCACTAG TAAGACAGAT TGCAAATTAT
CTTCGAGAAG AGAGAAAACT CTACAATAAA GAAAAATTTG ATTTGGTAAT TAATGATGGA
GATATGGGAT CAAATATTTT AGCAAAAAAC AGAAACATAC CAAGCTTATT CATAACAAAT
CAATTCAGAC CGAGATTATA CAATTCAAGA TCATATCTAT ATCCATCACT GATATTTGTT
GCAAAACAAA TTCAAAAAGC ATCAAAGATT CTTGTTGCAG ACTCTCCACC ACCTTATACA
ATGTGTGAGT ACAATCTAAA TGTCATAGAA GAAGCTGAAG AAAAGGTGAC TTATGTTGGT
CACTTTACAA ACAGTAAGAA AATTGAAAAG ACTGACAGTT CTGATCTTGA AAAACTAATT
GAGAATGATG AATTTGGGTA TTGGATGAGA ACTGGAAACA AATCAACAAA TGATGGAACT
GGTCAAAGAT ACGAAGAAGT ATTTCATAAA GAGGAAATGA AAACAGAAAA GAGGATAATT
TCACATGCAA GAAATGATCC AAATATTGAT TCTGTTATTG GCAAAGATGG AAAGAGATAT
TCCATATCTG ATGCATTAGA GAAGAAAATA GATTGGATTC AGATTGATAT TGGATTTCTT
TCAGAACAGG AAAAGGATAC TGTGTTGGAT CTATGCAAAT ATGCTGTAGT GAATGGTTCA
CATACAGTAA TGGGCGAGAT TATGGGTGGT AAAACAAAGC CAATCATCGG CATTCCCATC
TATGATGAGC ACACTAACAA CATCAAATGG GCCGAAGAGA AGAATTTGGG AATTCTAGCC
ACAAAAACAA AGCAGGTAAT TGAAGGAATA TCAAAGATTA GAGCAAATTA TGAGAGATTT
GAAGAGAGTT TAAACGAATT TTCAAAGAAT TTTGTCCCAA ACGGGGCTGA AAATTCAGCA
AAGATTGCTG CCCAAACGTT AGAAGAAAAG AGATAA
 
Protein sequence
MLKIGEFIYP WGSGHYSRMM RLNEVLGDHI KEDFEVHFSS KDHVYEKLLK KFPDEREKIH 
EILMPTPIDG KFGPSVSMSL MNLLLPISKN PPLVRQIANY LREERKLYNK EKFDLVINDG
DMGSNILAKN RNIPSLFITN QFRPRLYNSR SYLYPSLIFV AKQIQKASKI LVADSPPPYT
MCEYNLNVIE EAEEKVTYVG HFTNSKKIEK TDSSDLEKLI ENDEFGYWMR TGNKSTNDGT
GQRYEEVFHK EEMKTEKRII SHARNDPNID SVIGKDGKRY SISDALEKKI DWIQIDIGFL
SEQEKDTVLD LCKYAVVNGS HTVMGEIMGG KTKPIIGIPI YDEHTNNIKW AEEKNLGILA
TKTKQVIEGI SKIRANYERF EESLNEFSKN FVPNGAENSA KIAAQTLEEK R