Gene Nmar_0028 details

Gene Information

• Locus tag: Nmar_0028
• ID: 5774181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 22998
• End bp: 23549
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 641315645
• Product: hypothetical protein
• Protein accession: YP_001581366
• Protein GI: 161527540

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGAGC CATTTGGTTT TGATTTGCCA GATAATTCCA AAGAATTAAC AGATAAAGAA 
TATGTCAATT TGGTAAATCG AATTAGAGGT AATTTTCTTA GCTATGTTTC AGTTTTAGAT 
TCAACACTAA CGGTAATTAT TTCAGACTTA TTTTTACGTG ACAAAAATGA TTTTCCGTTG 
TGGGCAAAAA CTGTATTTGA TGAGGATAGA ACCGCATCTT TTGGAACAAA AATAGTTTGG 
ATATCAAGAA TAATGAAAAA TCATCAAGAA TTCAAAAAAG AAATTGAGGA AAAAACAAGA 
ATAAAGATTC AACAAAAACT AAATGAAATT AGAGAAATTA GAAATGATTT TGCACATAAT 
TTTGCACAGA ACAAAAAGAT CGAATCTGAA AATATAAAAA ATAGAATTAT CAAATTATAT 
GATTTTGAAG AAGGTATGAC TACACCGAAA TTATTCAAAA TGGAAGAAAT TATGGATTTG 
ATAAATGACC CATGGATTTT AGAACAACTT GAAAAAATAG AAGCACTAAC CAAAAAAATA 
AGAGAAAACT AG 

 

Protein sequence

MSEPFGFDLP DNSKELTDKE YVNLVNRIRG NFLSYVSVLD STLTVIISDL FLRDKNDFPL 
WAKTVFDEDR TASFGTKIVW ISRIMKNHQE FKKEIEEKTR IKIQQKLNEI REIRNDFAHN 
FAQNKKIESE NIKNRIIKLY DFEEGMTTPK LFKMEEIMDL INDPWILEQL EKIEALTKKI 
REN