Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0020 |
Symbol | |
ID | 5773786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 16889 |
End bp | 17794 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641315637 |
Product | transcription factor TFIIB cyclin-related protein |
Protein accession | YP_001581358 |
Protein GI | 161527532 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAGTA AAACAAAAGA ACTCTGTCCA AGATGTGCAC AGGGAAAATT AGTAACTGAT AATGAATCTG GAGAAATGTT TTGCTCCAAA TGTGGTTTTG TAATTACTGA AAAATTACAA GAGGCAGGTC CAGAATGGCG TTCTTTTACA CAAGATGAAC ATGGAGATCG AGCAAGAGCA GGAGCTCCTA CTTCATTAAC AATGCATGAT ATGGGTCTTG CAACAATTAT CAATCCAGTA AACAAGGATG CATCTGGTAG ACCACTTACA GCTTCAATGA AAAGTACCAT TGAGAGATTA AGGACCTGGG ATAGTAGAAG TCAGGTTCAT GAACCAGTTG ACAGAAACTT TAGACAAGCA TTTAGTGAAT TAAACAGACT AAAAGATAAA CTAGCAATTT CTGATGCAGT AATTGAAAAG GCAGCTTACA TTTACAGAAA AGCCCTTGAC AAAGGACTTG TTAGAGGCCG TTCTATTTCA GCACTAATGG CATCAGCACT TTATGCTGCA TGTCGTGATA CTGAAACTCC AAGAAATCTC AAAGATGTAG AGCAAGCAGC AAATATCAAA AGAAAAGATA TCGCAAGATG TTACAGATTA CTCGTTAAAG AACTTGATTT GAAGATGCCA GTTACAGATT CAATTCAATG TGTTGCAAGA ATTGCAAGTA GAATTGGAAT TGCAGAGAAA ACAAAAAGAT ACGCAGTCAA AGTTCTCAAA AAAGCACAAG AAAATGAGGT TTCTGCAGGA AAAGATCCTA TGGGATTAGC TGCTGCAGCA TTATACCTAT CATGTGTCAA AAATGGTGAG GATAAGACTC AAAGAGACAT TGCAGAGGCT GCAAATGTAA CTGAAGTTAC TATCAGAAAC AGGTACAAAG GACTCAAAGA GTCACTTGAA CTATAA
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Protein sequence | MVSKTKELCP RCAQGKLVTD NESGEMFCSK CGFVITEKLQ EAGPEWRSFT QDEHGDRARA GAPTSLTMHD MGLATIINPV NKDASGRPLT ASMKSTIERL RTWDSRSQVH EPVDRNFRQA FSELNRLKDK LAISDAVIEK AAYIYRKALD KGLVRGRSIS ALMASALYAA CRDTETPRNL KDVEQAANIK RKDIARCYRL LVKELDLKMP VTDSIQCVAR IASRIGIAEK TKRYAVKVLK KAQENEVSAG KDPMGLAAAA LYLSCVKNGE DKTQRDIAEA ANVTEVTIRN RYKGLKESLE L
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