Gene Nmag_1978 details

Gene Information

• Locus tag: Nmag_1978
• ID: 8824820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: -
• Start bp: 2008672
• End bp: 2010801
• Gene Length: 2130 bp
• Protein Length: 709 aa
• Translation table: 11
• GC content: 64%
• Product: sodium/hydrogen exchanger
• Protein accession: YP_003480111
• Protein GI: 289581645

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCACTCG CCGGATCAGA CAGCTTGTCG ACAACGTCGC CGCTCAGCGC GGAGTTACCG 
CTGACGTGGT TACTCGAGGG TTCCGTAGCG TTGACCCTTC CGTTCGACGA CCCCGTTGCG 
ATCTTCGGGC TCGCAGTGAC GATTTTCCTG ATCGCACCGC TGGTCCTCAA ACGATATCGG 
CTGCCGGGCA TCGTCGGCAT CATACTCGTC GGCGCGGTAA TCGGCCCGAA CGGGCTCCAC 
CTCCTCGAGC GCGGCGAGAC GATCCAGGTG CTCGGCGAGG TTGGCCTGAT CTACTTGCTA 
TTCATCGCCG GACTCGAGAT CAACCTCACG CAGTTCGTCG CGTACAGAGA CCGAAGTATC 
GTCTTCGGAC TGCTCTCGTT CACGATTCCA CAGGTTGTAG GCACTGTGGT CGGCGTCGCA 
GTGCTTGACC TGTCCGTTGC CGCCGCGTCG CTGTTCGCGG CGATCTTTTC CTCACACACG 
CTGCTCGCGT ATCCGGTCGT CACCCAGCTC GGCATCGCGA AAAACGAGGC CATTACTGCG 
ACCATCGGCG GAACGATCCT GACCGACACC CTCGCGCTGC TCGTGCTTGC GATCGTGATC 
GCCGCAGTCG GCGGCGACCT AGACGCCGCG TTCTGGGTGC AGTTGACGGC CGGGCTCGCC 
GTGTTCTTCG TCGGCGTCTG GCTCGTCGTG CCACGGCTCG GGCGCTGGTT CTTTCGCATT 
CATAGCGAGG AGAGCTACTT CGAATACCTG TTCGTCCTCG CCGTCCTGTT CGGTTGTGCA 
ATCCTCGCCG AACTCGTCGG CGTCGAGCAC ATTATCGGCG CGTTCCTCGC CGGATTGGCG 
CTCAATCGCC TCATTCCCGA AACTGGGCCG CTGATGAACC GCATCGAGTT CGTCGGCAAC 
GCGCTATTCA TCCCGTTCTT TCTGTTGTCA GTCGGCATGC TCGTCGATGC ACGGGTCTTC 
TTCGAGGGGA CCGAAACGCT CCTCATCGCT GGCTCGCTGC TCGGGATGGT CGTCACTACG 
AAGTACCTCG CCGCGTGGGC GACCGGTCGA CTGTACGACT ACGACCGCAA CGAGGTCTAC 
AGCATGTTCG GCCTCTCCGT CGGCCAGGCC GCGGCGGCGC TTGCGATCGT CCAGATCGGG 
TTCGACGCCG GCGTCGACGG ATTCGGCCAG CACATGATCA ACGGCGTCGT GGTGATGATC 
CTCGTCGTCA GCCTGTTCAG CCCCACGCTC GTCCAGCGAA CTGGTGCAGA GATTGCTCGT 
GCGCGCGAGC GTGAACCGTA CGACCCGGCG ACGGCCCCAC AGCGAATTCT CGTCCCGGCG 
GCACACGACT CGAGAGACCC CCGCTCACTG CTCGGACTCG CGATGGCGAT TCGCGACGAG 
CGAGCCGACG AACCGATCCA CGCGGTCACC GTCGTCCGTC CCGAGACGGT CACGCAGACC 
GCCGCTGCAG TCGGTGATGC GGAGACGCGG CTCGAAACGC TAGCAGACGA AACCGCGGCT 
GCAGAGGTGC CACTCGAGAC GCACACTCGC GTAAACCACA ATATCGCTTC GGGGATCGTC 
GGCTCGGTGC TCGACAATCG CATCACGACG CTGGTGATCG GCTGGGATGG GGCTCGAGCG 
CGGACGCAGC GGGTGTTCGG TCACGTGATC GATCAAGTGC TCCGGCGAAC GACGCAGCTC 
GCGCTCGTGG CGCGGATTCG CGACCGTCTC AATACGACAC AGCGGATCGT GCTCGTGCTC 
CCGCCGAACG TGGCTCGCAA CGACGGGATC GCCGAAGCGC TGCACACGGT GGCTCTCGTC 
GCCGAGCAGA CGGGAGCGCC GATCCACGGC GTTATGGTTG GCGAGGAGTC GCCGCAGTTC 
GAACGGCTGA TGGAGGCCAT TGCACCGGAG CAGCCAGTCG AGTTCGACAC GGTCGCGGAC 
TGGGATGACC TGACCCAACC GCTTCGCAGC GCAGGTGAGG CGGGCGACCT GATCATCTGT 
CTGAGCTCTC GCCGGACAGA CACGGGATGG CATCCGGAGC TCCAGACACT GCCAGCGCGA 
ATCGCGCGGC TCACCGAGGG GAACTTCGTG ATACTGTATC CGGCGGTGGC AGAGCAAACG 
GACGACCGGC AGTTCCTCCG GTTCTCCTGA 

 

Protein sequence

MSLAGSDSLS TTSPLSAELP LTWLLEGSVA LTLPFDDPVA IFGLAVTIFL IAPLVLKRYR 
LPGIVGIILV GAVIGPNGLH LLERGETIQV LGEVGLIYLL FIAGLEINLT QFVAYRDRSI 
VFGLLSFTIP QVVGTVVGVA VLDLSVAAAS LFAAIFSSHT LLAYPVVTQL GIAKNEAITA 
TIGGTILTDT LALLVLAIVI AAVGGDLDAA FWVQLTAGLA VFFVGVWLVV PRLGRWFFRI 
HSEESYFEYL FVLAVLFGCA ILAELVGVEH IIGAFLAGLA LNRLIPETGP LMNRIEFVGN 
ALFIPFFLLS VGMLVDARVF FEGTETLLIA GSLLGMVVTT KYLAAWATGR LYDYDRNEVY 
SMFGLSVGQA AAALAIVQIG FDAGVDGFGQ HMINGVVVMI LVVSLFSPTL VQRTGAEIAR 
AREREPYDPA TAPQRILVPA AHDSRDPRSL LGLAMAIRDE RADEPIHAVT VVRPETVTQT 
AAAVGDAETR LETLADETAA AEVPLETHTR VNHNIASGIV GSVLDNRITT LVIGWDGARA 
RTQRVFGHVI DQVLRRTTQL ALVARIRDRL NTTQRIVLVL PPNVARNDGI AEALHTVALV 
AEQTGAPIHG VMVGEESPQF ERLMEAIAPE QPVEFDTVAD WDDLTQPLRS AGEAGDLIIC 
LSSRRTDTGW HPELQTLPAR IARLTEGNFV ILYPAVAEQT DDRQFLRFS