Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmag_1617 |
Symbol | |
ID | 8824452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natrialba magadii ATCC 43099 |
Kingdom | Archaea |
Replicon accession | NC_013922 |
Strand | - |
Start bp | 1636410 |
End bp | 1637624 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003479755 |
Protein GI | 289581289 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00330929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAACG ATCCAAATGA CCCCCGTTCA CAGGGTGGCA GCTTAACGGA GCAGGAAGTC CTCCGACGGA TTGACCAGGG GCTTAGGGAT GCTGTTGAGG GGAAGGGGCT GAATTGGCAG ACAGGCACCC GTGTTAAACG CCAAAAGTAC ACGGAGGTCG CCCTTCAGCA TTACCTCGGT CCGATCCCAG CTGATGGCAG CCAGACAACG TCGCCGATAA CACGCAGCTG GTTCAAATAC GGCCCAACGG CTGTGATGGC ACCGTCAGGA TCGTATGCTG GGACCGGAAC TCAATCTCCG GCCGAGCCAC AAACTCCGAC CAACGATGGG CAACAGTCGG CAAGCGATTC ACAGACAGAT GACGGCGTCG ACTCACCGAC TGAGGAGTCC CCCAATCAGT GTATAGATAA TCATCCTGCT ATCGAGGAGA CGGAGCTTGG AGAGCTAACG GAAAATGACT ATCTGCAATT TTTCCTCGAC CAAGATTTTA CGCCGCCATT GACCAAGGAG TATTGGAACG GCGACGACTA CACATTTCTT CTGGAATACT ATGACGAATA TGCGCCCCCA CCTCTCAAAG ACATCTATCT GGCGAACGTG AAGTTACGGA TTACGCTTCG GGATGCACGA AAAACTACGT TCGACATGAT CGACAATCGA CCGCAGATTC TCACTGGCGA GCCCGAGGTA GCGGAACGAT GGAAAAGTAC ATCATTTGAA GCACAGGCCG GGCGAGCTGC AGTTAATCTC CGGCTGGCGC TTATGCGCGC TGAGTTCATT CCTTCGGCCG TCACTGGGGT TGTTCACGGT TTCACTGATT TGATTGAAGA TGTTCTCCTA GCAGTGGAGG CGAATGATGC GGCGGACATC CCTTTGACTG CCCCAGAGAC GCTCAACACA CTCGACGAAG TGTACGACGC GGTAATCTGG CAGTACATTT CTCACTATAT CTCTCAGCTG ACGGCGATTG GGCCCGACGC TGAGAGGTTG ACTCGGATTT CACAAGAACG GATCACAGCT CTCGAAGAAG AAGCACCTGC CAAGACACGC GAGCTTCAGG AGCAATTCGT ACGAGATGGG TTTTTGCCGG ATGTCCCTAC ATACCAATCG GCCGATCAGG ACAAAGAAAT CCGACTTTCT AACGCGCTCA CTGATGCCGC GCTCCGGCAG CAGCGGATAG AGACGGCTGA GGAGGAATCG GATAATGAGC AGTGA
|
Protein sequence | MSNDPNDPRS QGGSLTEQEV LRRIDQGLRD AVEGKGLNWQ TGTRVKRQKY TEVALQHYLG PIPADGSQTT SPITRSWFKY GPTAVMAPSG SYAGTGTQSP AEPQTPTNDG QQSASDSQTD DGVDSPTEES PNQCIDNHPA IEETELGELT ENDYLQFFLD QDFTPPLTKE YWNGDDYTFL LEYYDEYAPP PLKDIYLANV KLRITLRDAR KTTFDMIDNR PQILTGEPEV AERWKSTSFE AQAGRAAVNL RLALMRAEFI PSAVTGVVHG FTDLIEDVLL AVEANDAADI PLTAPETLNT LDEVYDAVIW QYISHYISQL TAIGPDAERL TRISQERITA LEEEAPAKTR ELQEQFVRDG FLPDVPTYQS ADQDKEIRLS NALTDAALRQ QRIETAEEES DNEQ
|
| |