| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1369 |
|---|
| Symbol | |
|---|
| ID | 8824202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 1402766 |
|---|
| End bp | 1404391 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003479510 |
|---|
| Protein GI | 289581044 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00896755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGC CACTGCTCGT GACAGATTTT CTCGATCGAG CACGACGTCA CTACAGTGAC
GAGGAGGCAG TTGTTTCGAC CACTGGGGAG CGCTATACGT ACGCCAAATT CGGTGATCGT
GCGGACCGTT TCTCGGCAGT GCTCCAGGGC CGGGGCATCG AGAAGGGCGA CCGGGTTGCG
GTGCTCGACC CGAACACGCA CTATCAGCTC GAGGCGGCCT ACGGGACGAT GCAACTTGGC
GCGATCCACA CGCCGCTCAA CTATCGCCTG ACGCCCGAGG ACTACGCCTA TATTCTCAAT
GACGCTGGTG TCGATGTGAT TTACGCGGAC TACGAGTACG CGGAGAAGAT CGAGGCAATC
CGCGAGGAGG TGCCGACGGA GACGTTCATC ACGAACGATG TCGACGCGGT CGAGGCAGGC
AGTGACTGGG AGTCGTTCGA CGACCTGCTC GCCGAGGCGA CCCCCGAGTA CGACCGCCCC
GAGATGACCG AAGACGAACT CATCACGATC AACTATACCT CCGGGACGAC CGGTGATCCA
AAAGGCGTCT GTCGGACCCA CCGGAACGAG ACGCTTCATG CCTACCTCAT CTCGATTCAT
CAGGAGATCC GGGACGACGA TGTCTATCTC TGGACGTTGC CGATGTTCCA CGTCAACGGC
TGGGGACACA TCTACGCTAT CACTGGAATG GGCGCGACAC ACGTCTGTAC GCGCGGTGTC
GACGCCGAGT CGATCATCGA GACGATCCAG GAAGAAGACG TCTCGTACCT CTGCGGTGCG
CCAACGGTGC TAAATCTGCT AATCGACTAT TACGAGGACG CCGCCGACGA ACCCGAGATG
CGCGGTGGGA CCGACGTTCG CATCGCAACC GCAGGGAGTT CGCCGCCGGA GGCGACTATC
CGCACCGTCG AAGACGAATT CGACTGGCGA CTCAAACACG TCTACGGCGC GACCGAAACC
GGGCCGCTGA TCACGACCTC CGACGCACGA CGTCACTTCG ATGCCGACAG CGACGAGCGG
TTCGCAATCA AGAAGCGACA GGGACTTGGC TTCCTCGGCA CCGAGGTCCG CGTCGTCGAC
GAGGACGGGG CGGACGTGCC ACGGGACAGT ACGACCATCG GCGAGGTCGT CGTCCGCGGC
AACCAGGTCA TGGAACGGTA CTGGAACAAA CCCGACGCAA CCGAGGAGGC GTTCTCCGAC
CGGATCGAGG GCTACTTCCA CACGGGCGAC CTCGGAACCG TCGACGAAAA CGGATTGGTC
GCGATCCAGG ACCGCAAGAA AGACATCATC ATCTCCGGTG GGGAGAACAT CTCGAGTATC
GAACTCGAGG ACACCCTGTT TGATCATCCC GGGGTTTCGG ACGTGGCGGT GATTCCGGCA
CCGAGCGAGC AGTGGGGCGA GACGCCGAAG GCGTTCGTCG TCCCGAACAG TGGCGATCCG
AACGAACCCG GCGTTTCGAC GGACGAGCTA GTGGAGTTCA CCCGTGAGAA CCTCGCGGGG
TACAAGACAG TTCACCGGAT CGAGTTCGTC AAGCAGTTGC CGACGACGGC GACAGGGAAG
GTCCAGAAGT ACGAACTGCG CGAGCAGGAG TGGGAGGACG AAGAGCAGAT GGTCGGGCAA
GGGTAG
|
|---|
| Protein sequence | MHKPLLVTDF LDRARRHYSD EEAVVSTTGE RYTYAKFGDR ADRFSAVLQG RGIEKGDRVA
VLDPNTHYQL EAAYGTMQLG AIHTPLNYRL TPEDYAYILN DAGVDVIYAD YEYAEKIEAI
REEVPTETFI TNDVDAVEAG SDWESFDDLL AEATPEYDRP EMTEDELITI NYTSGTTGDP
KGVCRTHRNE TLHAYLISIH QEIRDDDVYL WTLPMFHVNG WGHIYAITGM GATHVCTRGV
DAESIIETIQ EEDVSYLCGA PTVLNLLIDY YEDAADEPEM RGGTDVRIAT AGSSPPEATI
RTVEDEFDWR LKHVYGATET GPLITTSDAR RHFDADSDER FAIKKRQGLG FLGTEVRVVD
EDGADVPRDS TTIGEVVVRG NQVMERYWNK PDATEEAFSD RIEGYFHTGD LGTVDENGLV
AIQDRKKDII ISGGENISSI ELEDTLFDHP GVSDVAVIPA PSEQWGETPK AFVVPNSGDP
NEPGVSTDEL VEFTRENLAG YKTVHRIEFV KQLPTTATGK VQKYELREQE WEDEEQMVGQ
G
|
|---|
| |