| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1058 |
|---|
| Symbol | |
|---|
| ID | 8823889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 1080187 |
|---|
| End bp | 1081377 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | TrkA-N domain protein |
|---|
| Protein accession | YP_003479204 |
|---|
| Protein GI | 289580738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC GGACGCGCCG TTCCCTTCGG CGGGTGACCA CACAGCACCA GCCCAGTGTA
CGGGTCGTCG TCTGGCTCGT CACCACCATC GCAGTGGTTT CCATCGCAAC TGGTCTGCTC
GCGATCATCA CACAGCCGTT GGTCGATGCC GGCGGCACGG TCGGTCTCCT CCAGTCGGCC
GCCGAGTTCA GCGGCACTGT CCTCGGCTTT GCCCTTCTGA TCACCGCCTG GGGAATGCGC
CGGGGCTACC GAATCGCCTA TCTCGCCGCG GCGACCCTCA TTGCCCTCGC AGTCGCCCAC
GGTGTCGTCC AGTTCCGGCT GCTGTCGATT CCACTGATCA TCCTCTCGAT CGGCGGACTG
GTCGTCCTGG CATTTACGAG TACGCGGTTC ACCCGCTCGA GTGCACTCAC GCCGACGCAG
CTGGGCAGTC TCGTCGCCAT CGTCGGCGTC GGCTGTTACG GAATCGCTGG TGGGTACACG
CTCAGACACG AGTTCAGCGA ACTGCACACC GTCGTCGACG CGGCGTACTT CACGGTTGTG
ACAGCGAGCA CGGTCGGCTA CGGCGACGTG CACCCGACGA GCGAGGCCGG CCGCCTGTTC
GCCATCTCGC TCGCCATCCT CGGCCCGACG ACCGTCGCCG TCGCTGCCGG CAGCCTGTTC
GGTCCCGGCC TGCAGGCCCG TCTCACGAGA ACCGGCCGGC GGGCGACGGC ACACGCGAGA
GCGGAACTGC CACGCGAGCG CGTCGTCGTC CTTGGAACCG CCGGCCTGGT CTCGAACGTC
GTAGCCGAAC TCGCGAGTCG GGAGTCGTCA GTGCTCGTGG TGACGGCCGA CGACGAGAAC
GGGGCTAAAC AGACAACTGA GGACCGAACA GGTGAAACTA CCGTCCGCAT CGGTGATCCA
ACCGATGAAG AGGTACTCGA GTCCGCCCGC CTCGACGAGG CCGATGCAGT GCTGGTGGCG
ACGGGCGAGC CTGCTCAGGA TAGCTACGCT GTGTTGCTGG CGCGCGACAG GACAGACGCG
AGAATCGTTG CGATTACCGA CGATGCGTCG ACGGGGGCAC TCGAGCGGGC CGGCGCTGAC
GTGGTCCTCT CTCCCGCGCA GGTACTGACG AACGCGGCGG TCGACGCGAC GCTCGGGACG
GAAGAGGAGG GTTATTCGTC GTCGGCGTCA GCGGCTTCCC AGAGTGGATA G
|
|---|
| Protein sequence | MLDRTRRSLR RVTTQHQPSV RVVVWLVTTI AVVSIATGLL AIITQPLVDA GGTVGLLQSA
AEFSGTVLGF ALLITAWGMR RGYRIAYLAA ATLIALAVAH GVVQFRLLSI PLIILSIGGL
VVLAFTSTRF TRSSALTPTQ LGSLVAIVGV GCYGIAGGYT LRHEFSELHT VVDAAYFTVV
TASTVGYGDV HPTSEAGRLF AISLAILGPT TVAVAAGSLF GPGLQARLTR TGRRATAHAR
AELPRERVVV LGTAGLVSNV VAELASRESS VLVVTADDEN GAKQTTEDRT GETTVRIGDP
TDEEVLESAR LDEADAVLVA TGEPAQDSYA VLLARDRTDA RIVAITDDAS TGALERAGAD
VVLSPAQVLT NAAVDATLGT EEEGYSSSAS AASQSG
|
|---|
| |