| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4607 |
|---|
| Symbol | |
|---|
| ID | 4025757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007961 |
|---|
| Strand | + |
|---|
| Start bp | 62000 |
|---|
| End bp | 63430 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637965097 |
|---|
| Product | resolvase-like protein |
|---|
| Protein accession | YP_572005 |
|---|
| Protein GI | 92109719 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.435176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA CACGATGCGC GCTCTATGCG AGGGTGTCGA GTGAGGCGCA GACGCGCGAC
AACACGATTG CCAGCCAGGT CGTTGCATTG CAGGAACGCA TTGCGGCCGA CGGCTTCCTG
CTTGAGCCAG ATCACAGCTA CGTGGATGAT GGCTACAGCG GTTCGCTTCT GCTTCGTCCG
GCGTTGGAAC GGCTGAGGGA TGCGGTTGCC GGTGGCCAAG TCGACCGCCT TTATGTTCAT
GCCCCCGATC GGCTCGCCCG CCGCTATGCT CATCAGGCGC TGCTGATCGA CGAATTCCGT
CGTGCCGGTG TGGAGATCGT ATTCCTCAAC CGCCCCATTG GTGGCACAGC CGAGGATGAT
CTATTGCTTC AAGTTCAGGG CGTGATCGCC GAATATGAAC GGGCCAAGAT CCTCGAGCGT
AGCCGGCGTG GTCGCCGTCA CGCGGCATGC TCCGGCTCTG TCAGCGCGCT GACGGGCGCT
CCCTTCGGTT ACCGTTATGT GAGCCGCGAC CAGGGCGGCG GCTTGGCACG CTTCGAGGTG
GTGGAGGCGG AGGCACACAT CGTTCGTCTG ATCTTCGCAT GGGTCGGCCT GGATCGCATG
AGCCTGCGGG AGGTATGCCG ACGGCTGGAG CAGATCGGCT GCCGGACGCG GACAGGAACG
ACGCCTTGTT ACGCCTCCAC GATCCGCGGC ATACTTGCCA ATCCCGCCTA TGTCGGACGG
GCCGCTTTCG GGCGAGCCCG CTACCTGCCG CCACGACCGC GGTTGCGGCC GATCCGCGGT
CATTTGCAAC CCTCGCCGCA CGCTACCTCC CGCGTTGCCG TTCCGCCCGA AGAGTGGATC
GAGATCCCTG TTTCCTCGCT CGTCGATCCG GCCGTATTCG AGGCGGTCCA TGCTCAGTTT
GAGGAGAACC GGAAGCGCAA GCGCCAACGC ACGCCGAGTT CGGACTGGTT GCTGCAGGGC
CTCACGGTCT GCCGTCGTTG CGGCTACGCT TATTATGGCA AGCGCGCGCC TCGCGTCCAC
AAGTATGACC CGACGGACAC GCTGCGCTAC TATCGGTGTA TCGGCACGGA TGGTCATCGC
TTCAGCGGCC ATCGTGTTTG CGACAACCCG CAGGTGCGCG GCGATCACCT GGAAGAAGCG
GTGTGGGATC AGGTCAAAGG TCTCCTGGAG GATCCGCACC GCGTGGCCGG GGAATATCGC
CGCCGCCTCC TTGCGGCCCG TGACCAAGTC CGTGAACCGG AGGAGATCGT CCGCCTCGAA
CGACAAATGG CCACCTTGCG TCGCGGTATC GGCCGGCTGA TCGACAGCTA TGCCGAAGGC
ATCATCGACA AGGCGGAATT CGAACCGCGT ATCGCTGGTC TGAAACAACG CTTCTCACAG
CTCCAGGAGC GGCACCAAGC GGCGGTCGAA GTGGCCGAAT GCGAGCTCTG A
|
|---|
| Protein sequence | MTETRCALYA RVSSEAQTRD NTIASQVVAL QERIAADGFL LEPDHSYVDD GYSGSLLLRP
ALERLRDAVA GGQVDRLYVH APDRLARRYA HQALLIDEFR RAGVEIVFLN RPIGGTAEDD
LLLQVQGVIA EYERAKILER SRRGRRHAAC SGSVSALTGA PFGYRYVSRD QGGGLARFEV
VEAEAHIVRL IFAWVGLDRM SLREVCRRLE QIGCRTRTGT TPCYASTIRG ILANPAYVGR
AAFGRARYLP PRPRLRPIRG HLQPSPHATS RVAVPPEEWI EIPVSSLVDP AVFEAVHAQF
EENRKRKRQR TPSSDWLLQG LTVCRRCGYA YYGKRAPRVH KYDPTDTLRY YRCIGTDGHR
FSGHRVCDNP QVRGDHLEEA VWDQVKGLLE DPHRVAGEYR RRLLAARDQV REPEEIVRLE
RQMATLRRGI GRLIDSYAEG IIDKAEFEPR IAGLKQRFSQ LQERHQAAVE VAECEL
|
|---|
| |