| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4605 |
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| Symbol | |
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| ID | 4025373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | - |
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| Start bp | 57980 |
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| End bp | 61258 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637965095 |
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| Product | MCP methyltransferase, CheR-type |
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| Protein accession | YP_572003 |
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| Protein GI | 92109717 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.315944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGCCTC AAGAACTGCA CGGAGAGAAA GTCGAGGGCA AACAACCAAC CCCGGATCAA
TCCGGTGTGA TTGCCACTAA ACGACGTCCA CCCTCGCTGG TCGTTGGCAT CGGGGCTTCC
GCCGGAGGGC TGGACGCGTT TAAGAGCTTC TTTGAAGGCG TTCCGGCTGA TACTGGCATG
AGTTTTGTGC TGGTTCAGCA TCTCGACCCC AACCACAAGA GCCTTCTCGT CGAATTGCTC
AGGCCGCACA CGTCCATGCG GGTCGAAGAA GCGCGGGATG GTGTCGCGCT CGCGGCAAAC
CACATCTTTG TCATTCCGCC CAACGCAACG ATGACGATGG AAGGCGACCT TTTACGGGTT
TCGACACCCG CGCCGGCGCG CGAGTACCGG CGGCCAATCG ACACGTTTTT CACTTCGCTC
GCTGAAAATC AGCAGGAATG TGCTGTCGCC GTGGTTCTGT CCGGCGTCGG TAGCGATGGC
ACTTTGGGCG TCAAGGCGAT CAAGGAAAAT GGTGGATACA CGTTTGCTCA AGCGGAGTTC
AACGAGACGG CGATGAGCGG GATGCCCCGG AGCGCTGTGG CCACCGGGCT TGTCGATTGC
GTGGCGCCGG TCAAGAACCT GCCTGCAAAG CGGCTCGAAC ATCAAGCACA TCTAACCAAG
GTCGAAGAGC AGAAAGATTC GGAGGGCGTC CGTGATGACG TCAGGGAGAG TCTGACAACG
ATTACGTCGC TGCTGCGCAA ACGTCTCAAG CATGACTTCA GTGGCTACAA GCAAAATACC
ATAATCCGGC GCGTTCAACG CCGAATGCAG GTGCTCCAGA TCGAAGCCGT CCCCGCCTAC
GTGGAGCGTC TAAGGCGGGA GCCTCCCGAA GCCGACGCGC TGTTTCGTGA ACTTCTCATC
GGCGTGACCC AGTTTTTTCG CGATGAGTCG GCCTTCGAGG CTTTGAAGAC GGCAATTTTG
CCGTCCTTGC TTGCTGCCAA ACAACCGGAC GATACGATCC GTGTTTGGGT TGCAGGATGT
GCCACCGGAG AGGAGGTTTA TTCCATCGCC ATCGTGTTGA AGGAGGCCAT GGCCGAACTC
AACGTCGAGC CTTCGGTCAC GATCTTTGGC ACCGATATCG ACGGCAAGGC TGTCGCCTTC
GCCCGCGCCG CGCGCTACCG CAAGACCGAC GGTGTGTCTC CTGAGCGCCT GGGGCGCTGG
TTCGTGAGGG AGAGGGAACA CTATTGCCCG GTCGCGACGA TACGCGAGAT GTGCGTGTTC
TCCCAGCACA GCATCATCAA GGATCCACCA TTTTCCAAAC TCGATCTGGT GTCCTGCCGC
AATGTGCTGA TTTACATGGA CAACGAATTT CAGCATCGCG TCATGCAGAC TTTTCACTAC
GGGCTCAATC CGGGCGGCTA CCTGTTCCTG GGTCCTTCAG AAAGTGTCAG TCGCGAGATC
AAGCTCTTCA CCATTATCGA CAAAAAACAT CGCATTTTGC AGCGCCAGGA TGGCGTCAGG
GCCACGCTTC CCGTGGTTCA AACTGCATCA TCGTTGCGAG CGGTTGAACC AACGTGGTCT
GCGGAGGTTC ACGCAGAGGA TGGCATCGAC CAGAGCGCGC GGCGCGCCAT GGATAAATAT
GCGCCTGCAT ATTTTGTGAT CGACAGACAT TGCGAAGTTC TGCGTTTCTC GGGAGCGGAA
ACGGGCCGTT ATCTTGAGCC ATCGCCGGGA ACGGCCACCT TAAATCTGTT CGGCATTCTG
GCAAAGGCGC TGCGTTCGCA GGTTCGAAAT GCGGTGGACA CATCCTTCGC GACCCACCAG
ACCGTTGTCG ATGAGACTGT GGCCGCAACC ATTGATGGAC GCTGGTACTC GGTTCAGTTG
ATTGTCGAGC CCATCGTTGA GATTGCACGA TCACCGGCAT TTTTCATTGT TGCCTTTCGC
GAACGCGGCC CCCTTACGAA CGGCGGTGAA GCGGGGAAGA CCGCACCGGC GGTTAGCGAT
CTCGATGCAG CATCACATCA GCAGGAATTG CGGAGTTGGC AGGCCCGATA CAAGGCCGCC
AGCAACGAAC TGGAAACCCA CATCGAGAAC ATGAAGTCAG TGACGGAGGA ATACCAGTCC
GTCAACGAGG AATTGCAATC GTCGAATGAA GAGCTTGAAA CTGCCAAAGA AGAGATGCAG
TCGGTCAACG AGGAACTTCA GACCGTCAAC AGTGAGATGC AGAGCAAGAA CGATCAGCTG
AATGGAGTGA ACAATGATCT CCAGAACCTT CTCGACAGCA CCCAGATCGC GACCATCTTC
CTCGACGATA ACCTACACAT TAAGAATTTC ACACCGGCCG CGATGGAGCT GTTTGCACTC
CATGATTGCG ATCGTGGCCG CGCCATAACC GACATTGTTA CGTTGCTGGC TTATGACAAG
CTGCGCGAGG ATGTGAGGAA AGTCCAACGC ACGCTTGCGG TCGTCGAACA GGAACTGGAC
CTAAAGGATG AGAGCGCGAC GTTTATTATG CGGATACGCC CATACCGCAC GGTCAAGAAC
GTCATTACAG GCGTGGTAAT CACCTTCACC GATATTACTG AGCGAAAAGC ACAGGACGAT
CAACTAAGGG TGTTGATGAA GGAATTGCAG CACCGCACCA ACAATCTGTT CAGAGTGATT
CAGGCGATGG CGCGTCAGAC CGCCAAGCAT AGCGCGAATT TTGCAGACTT TGAGGTCCAA
TTCGGAGCGA GGATACAGGG GCTTTCGGAG TCCAATACCC TGCTTATCGG CCAGAATTGG
CAAAGTGTAT CCTTGGAGAG GCTGGTGCGT ACCCAGCTCG CGCCTTTCAT TGGAACGGAT
CAGGCTCGTC TCGAAATCGA TGGGCTTGCC GTATTCGTGG CAACCGAGGC CGTGCAGACC
CTTGGTCTGG CGCTACATGA GTTGGCGACC AACGCGTCGA AGTACGGCGC ATTATCGGTG
CCCGGCGGCA GAATCTTGCT TCAGTGGAAA TTTACCGGGG GAGATAAGAT TCCTGAAGGC
TTTCGACTGG AGTGGCGAGA GCGTGGTGGT CCGACCGTTA AGCCGGCCAA GCGCAGAGGT
TTCGGTCGAT TTGTCATTGA CCAGATGGTG ACCAGCTCGC TCCATGCCAC AGTTGGGATA
GATCTCGCCC CGGAAGGCTT CCGCTGGACG CTCGATATGC CAGCCAGCCA AGTTCAGCGG
GCGATGCCGG ATAAAGAGGG AATGAAAAAT GGCGAAAGTG GATCGGCACC GCTTTTCGAC
GTTGGGATTA AAAAACCCGA GCAGAGCGAT TACCTATGA
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| Protein sequence | MLPQELHGEK VEGKQPTPDQ SGVIATKRRP PSLVVGIGAS AGGLDAFKSF FEGVPADTGM
SFVLVQHLDP NHKSLLVELL RPHTSMRVEE ARDGVALAAN HIFVIPPNAT MTMEGDLLRV
STPAPAREYR RPIDTFFTSL AENQQECAVA VVLSGVGSDG TLGVKAIKEN GGYTFAQAEF
NETAMSGMPR SAVATGLVDC VAPVKNLPAK RLEHQAHLTK VEEQKDSEGV RDDVRESLTT
ITSLLRKRLK HDFSGYKQNT IIRRVQRRMQ VLQIEAVPAY VERLRREPPE ADALFRELLI
GVTQFFRDES AFEALKTAIL PSLLAAKQPD DTIRVWVAGC ATGEEVYSIA IVLKEAMAEL
NVEPSVTIFG TDIDGKAVAF ARAARYRKTD GVSPERLGRW FVREREHYCP VATIREMCVF
SQHSIIKDPP FSKLDLVSCR NVLIYMDNEF QHRVMQTFHY GLNPGGYLFL GPSESVSREI
KLFTIIDKKH RILQRQDGVR ATLPVVQTAS SLRAVEPTWS AEVHAEDGID QSARRAMDKY
APAYFVIDRH CEVLRFSGAE TGRYLEPSPG TATLNLFGIL AKALRSQVRN AVDTSFATHQ
TVVDETVAAT IDGRWYSVQL IVEPIVEIAR SPAFFIVAFR ERGPLTNGGE AGKTAPAVSD
LDAASHQQEL RSWQARYKAA SNELETHIEN MKSVTEEYQS VNEELQSSNE ELETAKEEMQ
SVNEELQTVN SEMQSKNDQL NGVNNDLQNL LDSTQIATIF LDDNLHIKNF TPAAMELFAL
HDCDRGRAIT DIVTLLAYDK LREDVRKVQR TLAVVEQELD LKDESATFIM RIRPYRTVKN
VITGVVITFT DITERKAQDD QLRVLMKELQ HRTNNLFRVI QAMARQTAKH SANFADFEVQ
FGARIQGLSE SNTLLIGQNW QSVSLERLVR TQLAPFIGTD QARLEIDGLA VFVATEAVQT
LGLALHELAT NASKYGALSV PGGRILLQWK FTGGDKIPEG FRLEWRERGG PTVKPAKRRG
FGRFVIDQMV TSSLHATVGI DLAPEGFRWT LDMPASQVQR AMPDKEGMKN GESGSAPLFD
VGIKKPEQSD YL
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