Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4244 |
Symbol | |
ID | 4025743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 194641 |
End bp | 196407 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637964781 |
Product | putative gluconate dehydrogenase |
Protein accession | YP_571689 |
Protein GI | 92109401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.659751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCCC AAGAGCTGAA GGAGCAGGCC ATGGCGAAGA AGCTTCCCGC GGTCGACGTA CTGCTCGTCG ACTTCGGCTG GACCGGCGCT ATCATGGGCC AGGAATTGAC GGACGCCGGC CTGCAGGTTC TAGCCCTCGA GCGCGGTGCC TGGCGCGACA CCCCAACGGA CTTCGCGACG ACCTTCATCC AGGACGAGTT GCGCTTCTAT TATCGATACG AGCTGTTTCA GGAGCCGGCC CGGGAAACTC TCGCCTTCCG CAACAACACA GGCGAGACCG CCCTGCCGAT GCGTCACCTG GGCTCGTTCT TGCCGGCAGC CGGCGTGGGT GGCGCAGGCA TTCACTGGAA CGGCCAGAAC TGGCGCTTCC TGCCGACCGA TTTCACGGTC CGCAGCCAGA CGACGCAGCG CTACGGAGCG CAGATGATCC CGGGGGACAT GACCATCCAG GACTGGGGAG TTACCTACGA CGAGTTGGAG CCTTATTACG ACAAGTGGGA ATATCTCTGC GGAATCTCGG GGAAAGCCGG TAACATCAAG GGGCAGATCC AGCCCGGCGG CAATCCGTTC GAGGGGCCGC GTTCGCGCGA TTTCCCGAAT CCGCCGATGG AGATGAGCTA CGCACCGGTG CTATTTGCCC AGGCCGCGAA GGAAATGGGT CTCTACCCAT TCCCTGCGCC AGCCGCCAAC ATGTCGCGCG CCTACACGAA CCCGCTCGGC GTGCAGCTCG GACCATGCAC CTACTGCGGA TTCTGCGAGA AGTTTGCGTG CGGCAATTAC TCCAGGTCGA GCCCTCAGAC CACGATCTTG CCCGTGCTGA TGCGCAAGCC GAATTTCACG CTCAAGACCG ACAGCGAAGT CATCAAGATC AATCTCGATA GCTCGGGAAA GCGCGCTGTC AGCGTGACCT ATGTCGACTT GCAGGGCGAG GAGTATGAGC AGCCGGCCGA TCTCATCATC ATGACGGCCT TCATCCTGCA CAATGTGCAT CTCTTGCTAG TGTCTGCGAT CGGCATGCCG TACGACCCAG CCACCGGCAA GGGCACGCTG GGCAAGAACT ACGCCTACCA GATCGTTTCC GGCGTCGATG TCTTTTACGA CGACAAGCTC CTCAACCTGT TCATCGGCGC CGGCGCGCTC GGCATGATCG TGGACGATTT CAACGGCGAC AACTTCGACC ACTCGAAGTT AGGGTTCATT GGCGGCGGCT ATCTCGCTTG CTGGACCACG AACGGCCGTC CCATCGAGAC CGATCTGACA CCGAAGGGCA CGCCGAAGTG GGGCGCGAAA TGGAAGAAGG CGGTGGTCGA CAACTACCTT AAGTCCATAT CCCTCGCCAC TCATGGAGCG GTGATGAGCT ACCGCGGCAA CTATCTCGAC CTCGATCCCA CTTATCGCGA TTTTCTCGGA CGTCCGCTGA TGCGGATGAC CTTCGACTAC ACGGACAACG AGCACAAGAT GTCGGATTTC CTGACGCAAA AGACCGCCGA CATTGCCAAA GCAATGAAGC CGCGAGAATT CCATGCCAAA CCGCGCGAGG GTCATTACGA CATCACGCCC TATCAAACGA CGCATAACAC CGGCGGTGCG ATCATGGGGG CAAACCCGCA AGAGAGTGTG GTCAACCGCT ACCTGCAGCA CTGGGACGTT TCTAATCTCT TCGTGATGGG ATCAAGTGCC TTCCCGCAGA ATCCCGGTAC AACCCGACCG GAACGGTCGG CGCCCTCGCC TATTGGGCGG CCAATGCGAT CAGGACGAAG TACCTGA
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Protein sequence | MESQELKEQA MAKKLPAVDV LLVDFGWTGA IMGQELTDAG LQVLALERGA WRDTPTDFAT TFIQDELRFY YRYELFQEPA RETLAFRNNT GETALPMRHL GSFLPAAGVG GAGIHWNGQN WRFLPTDFTV RSQTTQRYGA QMIPGDMTIQ DWGVTYDELE PYYDKWEYLC GISGKAGNIK GQIQPGGNPF EGPRSRDFPN PPMEMSYAPV LFAQAAKEMG LYPFPAPAAN MSRAYTNPLG VQLGPCTYCG FCEKFACGNY SRSSPQTTIL PVLMRKPNFT LKTDSEVIKI NLDSSGKRAV SVTYVDLQGE EYEQPADLII MTAFILHNVH LLLVSAIGMP YDPATGKGTL GKNYAYQIVS GVDVFYDDKL LNLFIGAGAL GMIVDDFNGD NFDHSKLGFI GGGYLACWTT NGRPIETDLT PKGTPKWGAK WKKAVVDNYL KSISLATHGA VMSYRGNYLD LDPTYRDFLG RPLMRMTFDY TDNEHKMSDF LTQKTADIAK AMKPREFHAK PREGHYDITP YQTTHNTGGA IMGANPQESV VNRYLQHWDV SNLFVMGSSA FPQNPGTTRP ERSAPSPIGR PMRSGRST
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