Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4215 |
Symbol | |
ID | 4025543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | - |
Start bp | 171874 |
End bp | 172269 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637964758 |
Product | transposase, IS4 |
Protein accession | YP_571666 |
Protein GI | 92109378 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACTCGA AGCTGCACGC CGTATGTGAT GGCCAGGGAC GTCCCATCAT CATGTTGCTC AGCGAAGGCC AGATGAGCGA TTACAAGGGC GCTGCGTTGA TGATCGACGC GTTGCCGTTG CCGCCGGCGA AGCAGTTGCT CGGCGACAAG GGATACGACG CCGACTGGTT CCGTCAGGCG CTCGCCGCGC GCGGCATCAC GCCATGCATC CCGTCGAAGT CGAACCGCAA GAAGCCGATC GACCATGATC GTGTGCTCTA TCGCCAGCGG CACAAGATCG AAAACATGTT CGGCAGGATC AAGGACTGGC GGCGCATCCA TACCCGCTAC GATCGATGCG CTCATACCTT CATGTCCGCA ATCTGCATCG CAGCCGCAGT CATCTTCTGG CTCTAA
|
Protein sequence | MNSKLHAVCD GQGRPIIMLL SEGQMSDYKG AALMIDALPL PPAKQLLGDK GYDADWFRQA LAARGITPCI PSKSNRKKPI DHDRVLYRQR HKIENMFGRI KDWRRIHTRY DRCAHTFMSA ICIAAAVIFW L
|
| |