Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4187 |
Symbol | |
ID | 4025627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | - |
Start bp | 144143 |
End bp | 146986 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637964734 |
Product | 4Fe-4S ferredoxin, iron-sulfur binding |
Protein accession | YP_571642 |
Protein GI | 92109354 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCAG ACTTGTCCGG GGTGAAGTCG GACGACGTCT TGCGATTTTC GCGGCGCGAT GCGCTTCGGA TATTCGCCGC GCACATGGCG CTCGCCGTTG CCGGATGCAG CAAGCCGGTC GAAGAAATCG TCCCCTATGT AAACATGCCG GAGGGCCTCG TGCCCAGCGA ACCGTTGCGG TTCGCCACCG CCGTGCCAAT GGGCGGTTAT GGCCTGGGGA TCATGGGGAT TTCGGTGGAT GGCCGCCCGA TCAAGGTCGA GGGCAATCCG CGTCATTTCG CCAGCCTCGG GGCGACCGAC GTTTTCGCCG AAGCGGCGGT CTTGTCGTTG TACGATCCGG ACCGGTCCCG CACCCCGACC CAGAAGGGGA GTATCGCATC GTGGGATGCA TTCCGTGCCG CGCTGCTGCC GCAGCTTGGA AAGCACGACA GGAATAGAGG CAACGGCCTG CGCCTGCTGA CCGGGCGCGT CACCTCGCCC ACATTGTTGC GCCAGATCGA CGGCCTGCTC GCGCGCTATC CACAGGCGAT GTGGCACGTC CATGAGCCGA TCGACGACAG CCTGGAGCGC CAAGGCACTG TTCTGGCGTT CGGCCGGGCG CTGCATGTAT TGCCGCGTCT CTACAAAGCC GAAGTGATGC TCTGTCTGGA TGCCGATCCG CTGGGGTCGG GTCCGAGCCA GATCGCCAAC GCGCGGCACT GGATCGAGGC TAGAAATCCC AAAACTCCTT CCGGTTTTGC GAGGTCCTAC GTCGTCGAAA GCGGGCCGAC GCTGACCGGC ACCAAGGCCG ACCATCGTCT GGCGTTGCAT CCCGCTGGCA TTTCCGACAT TGCAATCGCG GTCGCCAACA CCCTCGGCGC GGGAATGGCT CAGCCGAAAC TCTCGCCGGC CGCAGAGCGC TTTGCCAAGG CGGCGGCGGG CGACCTTATC GCGCACAAGG GCCACGCGCT GGTTCTGGCG GGACGCACGC AGAGGGCAGA CATTCATGCC CTCGCTCATT GGATCAATGC CCGACTCGAT GCTCCACTTG ATTTCATCGC GCCGTTCGAC CGCTCATCGG CTCATGAACC GTCCGCATTT GCGGCGCTCG CCGACGATCT TCAGGCTGGA CGGGTCGAAA CGCTTGTAAT CGTTGATACG AACATCGGTT ACGACGCGCC CGCGGATATG TCGATCGCTA CCGCGCTGGA TAAGGTTTCC TTCAGCGCTC ATCTCGGTTT ATACGCCGAT GAGACAGCCG GATTGTGTCA CTGGCACCTT CCGCAGTCCC ATCCGTTTGA AAGCTGGTCC GACCTGCGCG CGATCGACGG CACGGCTGCG ATCGTGCAGC CGCTGATCCG CCCGCTCTAC GCGACCCGTT CCGCGCACGA TTTCCTGACG ATGCTGACTG GGCAGGATGC TGTCTCGTCT TACGATCTTG TTCGTGAAAC GTGGCGATCG AGCGGAGCGG CTTCGTTCGA AGACTGGTGG CGGCAAACTT TGCATGACGG CGTCGTGCCG GCATCCGCGG CTCAGCCCGT GACCGCCGGA ACGCCGAAGC GCCCGGAGAT CACCTCGACC GAAGCGCAGG GTGAATTGAC GCTCGTTCTG TCTCCCGATT CCAGCGCATG GGACGGCCGG TTTGCCAACA ACCCCTGGCT CCAGGAGTGT CCCAAGCCCG TCAGCAAGGA AGTTTGGGGC AATGCATTGT GGATCAGCAC CGCGGACGCT GAGAGGCGCA ACCTGAAGAC CGGTGACGTG GTTCGTTTGT CCGTCAAGGA CCGTGCGGTC GAGACGCCAG TTCTCGTGAC CGGCGGATGC CCGCCCGGCG TCGTCAACCT CACACTCGGC TATGGCCGCC GGAATGCCGG CGCCATCGGT AGTTCGATCG GCGCCAATGC CTATCGCCTT CGCACATCCG ATGCACTGTG GACCATCGAA GGCGTTACCA TCGCAGCCAC TGCCGAGCGA CGAGAGATCC TGACTACCCA AAACCACGTC CGGCTGGAGG GGGATGCGCG CGATCTTTAT CCCATCCGGT CGTTGAAGGA TATCGCAGAA GCAACCGGGC CAGATGCAAC GGATCGTCCG CTGCCGACGC TTTATCCTCC GGTGGCCTCG GACACCTATG CCTGGGGCAT GGTGATCGAC ACCGCGGCCT GCATCGGCTG CAACGCCTGC GTCGTCGCCT GCCAGGCCGA AAACAATGTG CCGGTCGTCG GTCCCGAGGA GATTGCACGC GGCCGCGACA TGCATTGGTT GCGCATCGAT ATCTACGATC ACGGCACATC CGACATGCCA GAGACGGGAT TTCAGCCAGT GCCGTGCATG CAATGCGAAA ACGCGCCGTG CGAGCCGGTT TGTCCCGTCG CCGCCTCCGT CCATGACAGC GAGGGCCTGA ATGCACAGGT CTATAATCGC TGTGTCGGCA CGCGCTTCTG TGAGGCCAAC TGTCCCTACA AGGTCCGTCG CTTCAATTTC TTCGGCTACG CGGATGGTCA GGAGTACGCC AACCTCGGCG CCGAGACGAT CAAGGCACAG CGCAACCCGG ATGTCTCGAC CCGGCAGCGC GGCGTGATGG AAAAATGCAC CTACTGCGTT CAGCGCATCA GCCGCGCCCG CCGTGAGGCG AAGAAGGAGG ATCGCACGAT TGCCGACGGC GAAGTCGTTA CCGCCTGTCA GAGCGCGTGC CCGACGCAGG CCATTACCTT TGGCGACCTC AACGATCGGA GCAGTGCAGT AAAGGGTCTC AAGAACGATC CGCGGAATTA TGCGCTGCTC GGTCACCTCG ATACGCGTCC GCGCACCACC TATCTGGCGG ACCTCCGCAA CCCGAACGGC GCGCTCAAAG GGGAGCGTTC ATGA
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Protein sequence | MKPDLSGVKS DDVLRFSRRD ALRIFAAHMA LAVAGCSKPV EEIVPYVNMP EGLVPSEPLR FATAVPMGGY GLGIMGISVD GRPIKVEGNP RHFASLGATD VFAEAAVLSL YDPDRSRTPT QKGSIASWDA FRAALLPQLG KHDRNRGNGL RLLTGRVTSP TLLRQIDGLL ARYPQAMWHV HEPIDDSLER QGTVLAFGRA LHVLPRLYKA EVMLCLDADP LGSGPSQIAN ARHWIEARNP KTPSGFARSY VVESGPTLTG TKADHRLALH PAGISDIAIA VANTLGAGMA QPKLSPAAER FAKAAAGDLI AHKGHALVLA GRTQRADIHA LAHWINARLD APLDFIAPFD RSSAHEPSAF AALADDLQAG RVETLVIVDT NIGYDAPADM SIATALDKVS FSAHLGLYAD ETAGLCHWHL PQSHPFESWS DLRAIDGTAA IVQPLIRPLY ATRSAHDFLT MLTGQDAVSS YDLVRETWRS SGAASFEDWW RQTLHDGVVP ASAAQPVTAG TPKRPEITST EAQGELTLVL SPDSSAWDGR FANNPWLQEC PKPVSKEVWG NALWISTADA ERRNLKTGDV VRLSVKDRAV ETPVLVTGGC PPGVVNLTLG YGRRNAGAIG SSIGANAYRL RTSDALWTIE GVTIAATAER REILTTQNHV RLEGDARDLY PIRSLKDIAE ATGPDATDRP LPTLYPPVAS DTYAWGMVID TAACIGCNAC VVACQAENNV PVVGPEEIAR GRDMHWLRID IYDHGTSDMP ETGFQPVPCM QCENAPCEPV CPVAASVHDS EGLNAQVYNR CVGTRFCEAN CPYKVRRFNF FGYADGQEYA NLGAETIKAQ RNPDVSTRQR GVMEKCTYCV QRISRARREA KKEDRTIADG EVVTACQSAC PTQAITFGDL NDRSSAVKGL KNDPRNYALL GHLDTRPRTT YLADLRNPNG ALKGERS
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