Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4051 |
Symbol | |
ID | 4025377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 9324 |
End bp | 10238 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637964639 |
Product | AAA ATPase, central region |
Protein accession | YP_571547 |
Protein GI | 92109259 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | [TIGR02880] probable Rubsico expression protein CbbX |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.16821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAA AAGTCAACAT TCGCGAGGAA CTCGAAGCCG TCGGAATCGG AGAGATTCTC GCGCAACTCG ATCGAGAGCT TATCGGTCTC AAACCCGTCA AGACGCGTCT CCAGGAAATT TCCTCTCTGT TGCTTGTCGA ACGGATACGC AAGAAAATGG AACTGACGTC GGAGACTCCG ACGTTGCATA TGTCGTTCAC CGGGAATCCC GGGACCGGCA AGACCACCGT TGCCTTACGG ATGGCCGATA TTCTCCATCG CCTCGGTTAT GTGCGCCGTG GTCATGTCGT GTCGGTCACG CGCGACGAAT TGGTCGGACA GTATATCGGT CACACCGCGC CGAAGACCAA AGAGATATTG AAAAAGGCGA TGGGCGGCGT GCTGTTCATC GACGAGGCCT ATTACCTCCA CCGGCCCGAC AACGAGCGCG ACTACGGCCA GGAAGCCATC GAGATCCTGC TTCAGGTCAT GGAGTCGCAG CGCGAGGACC TGGTGGTGAT TCTCGCGGGC TACGCCGACC GTATGGAAAA ATTCTTCTCC AGCAATCCCG GCTTCCGCTC GCGCATCGCG CATCACATCG ACTTCCCCGA CTACAGCAAC GACGAACTGC TCGCGATCGC GGAAGTCATG CTGAGCAAGA TGAACTATAA ATTCAACCCC GAAGCCCGCG AGGCGTTTGT ACGCTACATC GCCTTGCGCA AGGCCCAGCC CTTGTTCTCC AACGCGCGTT CGATCCGCAA CGCGTTGGAC CGTATCCGCC TGCGTCAGGC CAATCGCCTG GTCGCGGACC AGAACGCCGT TCTCTCTGTC GAGGATGTCA AGTCGATCAC AGCGTCCGAC GTTCTTGCCA GTCGCGTGTT TGAGACGTCG CAGCCTGCCG TCGTCGAGCA ACTGATGGAC AAGAGGAAGC GGTAG
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Protein sequence | MQEKVNIREE LEAVGIGEIL AQLDRELIGL KPVKTRLQEI SSLLLVERIR KKMELTSETP TLHMSFTGNP GTGKTTVALR MADILHRLGY VRRGHVVSVT RDELVGQYIG HTAPKTKEIL KKAMGGVLFI DEAYYLHRPD NERDYGQEAI EILLQVMESQ REDLVVILAG YADRMEKFFS SNPGFRSRIA HHIDFPDYSN DELLAIAEVM LSKMNYKFNP EAREAFVRYI ALRKAQPLFS NARSIRNALD RIRLRQANRL VADQNAVLSV EDVKSITASD VLASRVFETS QPAVVEQLMD KRKR
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