Gene Nham_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3975 
Symbol 
ID4030885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4346307 
End bp4347044 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID637972335 
Producthypothetical protein 
Protein accessionYP_579109 
Protein GI92119380 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGGAG TCGACCTCGC GGGTAGTAGT TTACATTGGA CGGGCTCGGC CGAACATTTA 
ACTTGCTACC AGGCGTCGTC GTTCCCTCTT AAAACCGAAG GACCTGTTTG TTTGAGCATC
GCCGGCCTCT TAGCGGAATA CGGGCCTTGG CTTGTGTTCG CCGTTGTCGC GCTTGAGAGC
GCGGGTATCC CATTGCCTGG TGAAACCACC CTGATCGGAG GAGCAGTCTT GGCTGCTACG
AGACACGATA TTTCGATCTT TTCTGTCGTT TTTGCTGCAG TCGCCGGTGC GATCACAGGA
GATAATTTGG GCTATTGGGC AGGGCGTTAT TTCGGACCGA GGTTTGTGCG GCGCTATACC
CACCGTCTAC ATCTGACTGA AGACCGCGTC AGCATTGCCC GATATTTGTT CCGTCGATAT
GGCGGTTGGC TCGTTTTCTT TGGACGATTT GTCGCGCTCC TGCGGGCTTT CGCCGCGATC
TTGGCTGGCG CGAACGGCAT GGCCTGGAAT CAGTTTCTGC TTTTCAACAG CCTAGGTGCG
ATTTGTTGGG CATCTCTGTT CGGATTTGGC GCATATGGAT TGGGAGCCGG CGTCAACAAG
CTCGCCGGCG GATTTGCGAT CGCGTTTCTT GCAATCGCTG CAGTCGTGTT GTTCTTTCTC
ATGCGAGCCT TTCATCGCTA TGAGCGTCAA CTCATGAAGT TGGCGAGGGA AGATGAACAA
AGGACCCGGA GAGGGTAG
 
Protein sequence
MSGVDLAGSS LHWTGSAEHL TCYQASSFPL KTEGPVCLSI AGLLAEYGPW LVFAVVALES 
AGIPLPGETT LIGGAVLAAT RHDISIFSVV FAAVAGAITG DNLGYWAGRY FGPRFVRRYT
HRLHLTEDRV SIARYLFRRY GGWLVFFGRF VALLRAFAAI LAGANGMAWN QFLLFNSLGA
ICWASLFGFG AYGLGAGVNK LAGGFAIAFL AIAAVVLFFL MRAFHRYERQ LMKLAREDEQ
RTRRG