Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3975 |
Symbol | |
ID | 4030885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4346307 |
End bp | 4347044 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637972335 |
Product | hypothetical protein |
Protein accession | YP_579109 |
Protein GI | 92119380 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTGGAG TCGACCTCGC GGGTAGTAGT TTACATTGGA CGGGCTCGGC CGAACATTTA ACTTGCTACC AGGCGTCGTC GTTCCCTCTT AAAACCGAAG GACCTGTTTG TTTGAGCATC GCCGGCCTCT TAGCGGAATA CGGGCCTTGG CTTGTGTTCG CCGTTGTCGC GCTTGAGAGC GCGGGTATCC CATTGCCTGG TGAAACCACC CTGATCGGAG GAGCAGTCTT GGCTGCTACG AGACACGATA TTTCGATCTT TTCTGTCGTT TTTGCTGCAG TCGCCGGTGC GATCACAGGA GATAATTTGG GCTATTGGGC AGGGCGTTAT TTCGGACCGA GGTTTGTGCG GCGCTATACC CACCGTCTAC ATCTGACTGA AGACCGCGTC AGCATTGCCC GATATTTGTT CCGTCGATAT GGCGGTTGGC TCGTTTTCTT TGGACGATTT GTCGCGCTCC TGCGGGCTTT CGCCGCGATC TTGGCTGGCG CGAACGGCAT GGCCTGGAAT CAGTTTCTGC TTTTCAACAG CCTAGGTGCG ATTTGTTGGG CATCTCTGTT CGGATTTGGC GCATATGGAT TGGGAGCCGG CGTCAACAAG CTCGCCGGCG GATTTGCGAT CGCGTTTCTT GCAATCGCTG CAGTCGTGTT GTTCTTTCTC ATGCGAGCCT TTCATCGCTA TGAGCGTCAA CTCATGAAGT TGGCGAGGGA AGATGAACAA AGGACCCGGA GAGGGTAG
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Protein sequence | MSGVDLAGSS LHWTGSAEHL TCYQASSFPL KTEGPVCLSI AGLLAEYGPW LVFAVVALES AGIPLPGETT LIGGAVLAAT RHDISIFSVV FAAVAGAITG DNLGYWAGRY FGPRFVRRYT HRLHLTEDRV SIARYLFRRY GGWLVFFGRF VALLRAFAAI LAGANGMAWN QFLLFNSLGA ICWASLFGFG AYGLGAGVNK LAGGFAIAFL AIAAVVLFFL MRAFHRYERQ LMKLAREDEQ RTRRG
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