| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3828 |
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| Symbol | |
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| ID | 4030605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4203949 |
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| End bp | 4205763 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637972218 |
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| Product | hypothetical protein |
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| Protein accession | YP_578992 |
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| Protein GI | 92119263 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.220846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAATCG CAAAGCTAGA GATCGAGAAT TTTCGGGGTA TCCGCGAAGG CGTCGTTCGC
TTTTCACCTC ATACCGTCCT CGTCGGCTCA AATAACTGCG GGAAGACTAC AGTTGTCGAA
GCGCTGGCGC TTTTGTTCGG CCGGGATCGG ATGGTCCGCC AACTGACCGA GCATGATTTC
TACGGCAGCA ACCCTCAGCC CGTGGACCGA ATTCGCCTTG TCGCCACGGT CATCGATTTT
GATGGTGACG ACCCGGCTCA GCATATGGAC TGGTTTCGGG ACGATCGCGG AATCGTAAAG
TGGTGGAATC CGGTCGATGG CGCCGTGATG CCCGCCCGCA CCGACCCGTC ATGGAAGCTC
GCATGCCAAG TCACTTTCGC CGCGCGATTT CACAGGCCGT CGCTCGAAGT AGAGACGCTT
CGGTACTTCC ACGACGACGA TGCGGTAGGC GATGTGTTTG CCGACGAGAG CGCCACTGCT
TTCTCCGCGC GCTTGATCCG CGACATCGGG TTCTTCTTCG TGCCGGCCGC CCGGACATGG
GATCGGACGG TGTCGTTCGG ATCGGAGTTA TTTCGCAGGG TCGTAGCCGC CGGCGAAGGG
CAGCCGTCCG AGTCAGTTCT TAGCGAGCGG GACAGATTGC GCATGCCGGA GGCGCGGCTT
GAGCAGGATG AGCGCTTGGC TCCGATCGTC AATCGCCTGA ATCAGGAGCT ACGCGGTTTC
TTCCGGACAG CTCCCACGCT CCATTTGAGA GTGACGGCTA CTGATAGCGA TGGCCTGCTT
GAATCCGTCG TCTCGCACTA TGCCCATGAG GGGGCTGATC TCCCTTTGCC AGCAAGGCGG
CATGGCAGCG GCCTTCTCTC GCTCCAGCAT CTGCTTCTGC TGTTGCAGTT TGGCCGTATG
CGCGCCGAAG CCAACGAAGG ATTTTGGATG GCGCTTGAGG AGCCGGAGCT GCATGTGCCG
CCGGCCCTAC AGCGTCGACT GGTTCATCGA ATTCAGGCCC TTTCCCGACA GACGTTCGTC
TCGACCCATT CGCCGATGGT GGCGGCACTC GCAGACCCGA AGGGCGTGGC GGTTCTCCGC
AATGACGGAG GAGTGCTGAC TGCCATTCCT TTGCTGACAT CCACACTGCC TGCTGACACG
CCGAACAGCG TGCGGAAGCT GTTCCAGGTC AACCGCGTCG AAACGGTCGC GGCCGTGATG
CACGAGTTTG TCTTGGTTCC CGAAGGACGT ACCGACTATG AATGGCTCGG GCTGCTGGTT
CGCGCGGTCG ATCTGCATCA AAGCTGGGCG GCGGCGGACG AGTGCCGTTT CGATGCTTTT
GTCGGCGTGA TCCCGACGCA TGATGGCGCT GTCGTCAGGA CGGTCGAGGC CATGGCGCCG
TTGCATCCCC GCGTTGTGGC GATGGTCGAC GGGGACGTGG AGGGCGTCGG ATACGCCGCA
ACTCTTGTGG CGGCCGGATC TCCAAACTCG GGCGTGATCC TTCGGTGGGC GGATGGCCAG
ATGCTTGAGG ATACCATTGG CTGGATCATC AATGCCAATG CGAATGCCTG TCTTCCGGCG
ATTCAGATCG ATCAACCGGC AGCCACCGTG GCAGAGCTGG TCGCGCGCCT AAAAAGCGAC
AATCGCGCTG CCGGGGGACT GAAGAAGGAC ACGTCAAGCT ACGAGATCAT CGCGGGCGCG
ATCGGCGCCA CGGAAGCCTG TTGTGCGCGA GCGCGGTCGT TGCTCAACGC GATCACCGAT
GTGGTGAAGG GAGAGAACAA CCCGCTGTTT GCCGCGGATG CTGCTAATCC GGCGGTCAGG
GCGTTCCAAC CGTGA
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| Protein sequence | MQIAKLEIEN FRGIREGVVR FSPHTVLVGS NNCGKTTVVE ALALLFGRDR MVRQLTEHDF
YGSNPQPVDR IRLVATVIDF DGDDPAQHMD WFRDDRGIVK WWNPVDGAVM PARTDPSWKL
ACQVTFAARF HRPSLEVETL RYFHDDDAVG DVFADESATA FSARLIRDIG FFFVPAARTW
DRTVSFGSEL FRRVVAAGEG QPSESVLSER DRLRMPEARL EQDERLAPIV NRLNQELRGF
FRTAPTLHLR VTATDSDGLL ESVVSHYAHE GADLPLPARR HGSGLLSLQH LLLLLQFGRM
RAEANEGFWM ALEEPELHVP PALQRRLVHR IQALSRQTFV STHSPMVAAL ADPKGVAVLR
NDGGVLTAIP LLTSTLPADT PNSVRKLFQV NRVETVAAVM HEFVLVPEGR TDYEWLGLLV
RAVDLHQSWA AADECRFDAF VGVIPTHDGA VVRTVEAMAP LHPRVVAMVD GDVEGVGYAA
TLVAAGSPNS GVILRWADGQ MLEDTIGWII NANANACLPA IQIDQPAATV AELVARLKSD
NRAAGGLKKD TSSYEIIAGA IGATEACCAR ARSLLNAITD VVKGENNPLF AADAANPAVR
AFQP
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