| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3716 |
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| Symbol | |
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| ID | 4030586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4094809 |
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| End bp | 4096392 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972127 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_578902 |
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| Protein GI | 92119173 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0878035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATG ACCTCGCCCT CGGCGGAGGC AGCGTACTCT GCTGCGTGCT CGCAACCGTG
GTTGCGATCG CATCGCCTTC CACGGCTTTC GCGCAGTCGA GTTCCGAAAC CAAGCTGCCG
CCGCTCACGG TAACGGCGCC GCAATCTATC CGACCACAGC AGAGCCGTGC GTCGCGCCCC
TCCGCCGGAC GACGCACAAC GCATCAAGCG GCTTCGCGAA CGGCCGCGCC GGTGCCGTCA
GCCACCTTCC CCGCCATCGA GCGCAACATG CTCAGTGGAG CGCCAGGCCC GCTGAACCTC
GATGTGCCGA ATGCGGCCGG CAGCCTCGTC GGGCTAACGC CGCGCGAGAC GCCGGCGACC
GTCAACATCG TCACACAGCA GGAGATGCAG GAGAAGGGCC TTCGCACGAT GGTGGAGACC
CTCAACTCGG TTCCGGGCGT CATGTCGGGG AACCTCCCCG GCGAACCCGG CGTGATCTCC
ATGCGCGGAT TCTCCCGCGC GGCGACCGGA TACGCGATCG ACGGCGTTCG CGCGCCTGAC
CCGTTGATCG TCTCCCGGGA TTTCGACACC TTCAATTTCG AGCGCGTCGA GATTTTGAAA
GGGCCCGCTT CCGTTATTCA GGGTACCGGA GCCCTGGCCG GGGCCGTGAA CCTTGTAACG
AAGCAACCCA AACTCGGACA GGCGAGCGCC GAATCTCTGT TCAGCTACGG CAGCTTCAAT
TCGCTGCGAA CGGGTATCGA CGTCAACGCC CCGATCGGAT CAAACGCCGC CGTGCGTTCG
ACGCTGAGCT ATGGACAATC CGACGGCTAT GTCGACGACA CCCGATCGCG GAAGGTTGGC
GCAACCACCA GCGGGACGTT CACCCCGACC GACAGGCTCA CCTTTTCCGG CTCGGCCAAC
TTCTTCCACG ACGAGTTCCG AACGCCCTAT CAGGGCATCC CGCTGATCGC TCGCTCGCTG
GCGCGCGATC CCACGAACCT GGTTACGGCT CCCAACGGGT TTGTGGTCGA CCGGTCCATT
CGCAACCAGA ATTATAATGT CGAGAACGGG CTGATGACGT CGGACACTGT CTGGCTGAAA
GGCGGCGCCG AATACAAGCT GACCGACAAC TGGACGCTGA AGAATGACCT GAGCTTCTTC
AAAGCCGACC GCTATTGGGC AAACTCCGAA GATTTTACGT TCAACGCCGC AACCGGCCTG
CTCGACCGCT CCACGTCAAA GATCACGCAC GATCACCAGT TCTGGTCGGA ACGCGCGACG
GCATCCTACG ACGGCATGAT CGGCGGATTC CGCAACCGCT TTGCGGCCGG GCTTGAGTAT
GTCGACACGG CTTTCGACTC AAACAGACGG TTCGGGTCCA CGACGTCGGT CGATCCGTTC
AATCCAGCCC GCGGCTACTT CCCTGCCGAT ACGGCCGCGA ACTTCCCGAC ACGACAAGAC
TTCGCCAGTG GCCTGAAGAC TTTTGCAGTG TTCGCGGAGA ACGCCGTCAA CCTGACGCCG
GACTGGCTGG TGCTCGCCGG CATCCGGCAT GAGAGCATGA GGCTCGATCG GGGGATCGAC
GTGTCAATCG GCGCCGAAGT TTGA
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| Protein sequence | MSNDLALGGG SVLCCVLATV VAIASPSTAF AQSSSETKLP PLTVTAPQSI RPQQSRASRP
SAGRRTTHQA ASRTAAPVPS ATFPAIERNM LSGAPGPLNL DVPNAAGSLV GLTPRETPAT
VNIVTQQEMQ EKGLRTMVET LNSVPGVMSG NLPGEPGVIS MRGFSRAATG YAIDGVRAPD
PLIVSRDFDT FNFERVEILK GPASVIQGTG ALAGAVNLVT KQPKLGQASA ESLFSYGSFN
SLRTGIDVNA PIGSNAAVRS TLSYGQSDGY VDDTRSRKVG ATTSGTFTPT DRLTFSGSAN
FFHDEFRTPY QGIPLIARSL ARDPTNLVTA PNGFVVDRSI RNQNYNVENG LMTSDTVWLK
GGAEYKLTDN WTLKNDLSFF KADRYWANSE DFTFNAATGL LDRSTSKITH DHQFWSERAT
ASYDGMIGGF RNRFAAGLEY VDTAFDSNRR FGSTTSVDPF NPARGYFPAD TAANFPTRQD
FASGLKTFAV FAENAVNLTP DWLVLAGIRH ESMRLDRGID VSIGAEV
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