| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3698 |
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| Symbol | dapD |
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| ID | 4030684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4070672 |
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| End bp | 4071517 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637972108 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_578884 |
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| Protein GI | 92119155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTCG CCTCTCTCGA GACCACGATC AACGGCGCCT TCGACGCGCG CGAGACCGTC
ACCGCCGCGA CCAAAGGCGA GGTGCGCGAG GCGGTGGATC ATGCGCTCGA CCTCCTCGAC
AAGGGCGAGG TGCGCGTTGC CGAGCGCGCG GCGGATGGCA AGTGGACTGT CAATCAGTGG
CTCAAGAAGG CGGTGCTGCT GTCGTTCCGT CTCAACGACA TGAGCGTCAT TCCCGGCGGC
CCGGGTAAGG CTGTGTGGTG GGACAAGGTG CCGTCGAAAT TCGAGGGTTG GGACGAGAAC
CGGTTTCGTG ACGCCGGCTT TCGCGCCGTG CCGGGCGCGA TCGTCCGCCG CTCCGCCTAC
ATCGCGAAAA ACGCGGTGCT GATGCCGTCG TTCGTCAATC TCGGCGCCTA TGTCGACGAG
AGCACCATGG TCGACACCTG GTGCACGGTC GGCTCCTGCG CCCAGATCGG CAAGCGCGTG
CACATCTCCG GCGGCGCCGG CATCGGCGGC GTGCTGGAGC CGCTGCAGGC CGGACCCGTG
ATCATCGAGG ACGATTGCTT CATCGGCGCG CGCTCGGAAG TGGCGGAAGG CGTGATCGTG
CGCAAGGGCG CGGTGCTGTC GATGGGCGTG TTCCTCGGCG CCTCCACCAA GATCGTCGAT
CGCGAAACCG GCGAGATCTT CATGGGCGAA GTGCCGGAAT ATGCCGTGGT GGTGCCGGGC
GCGCTGCCGG GCAAGCCGCT GAAGAACGGC CAGCCGGGCC CGTCCACCGC CTGCGCGGTC
ATCGTCAAAC GCGTCGACGA GCGCACCCGC TCCAAGACCG GCATCAACGA ACTGCTGCGG
GATTAG
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| Protein sequence | MSLASLETTI NGAFDARETV TAATKGEVRE AVDHALDLLD KGEVRVAERA ADGKWTVNQW
LKKAVLLSFR LNDMSVIPGG PGKAVWWDKV PSKFEGWDEN RFRDAGFRAV PGAIVRRSAY
IAKNAVLMPS FVNLGAYVDE STMVDTWCTV GSCAQIGKRV HISGGAGIGG VLEPLQAGPV
IIEDDCFIGA RSEVAEGVIV RKGAVLSMGV FLGASTKIVD RETGEIFMGE VPEYAVVVPG
ALPGKPLKNG QPGPSTACAV IVKRVDERTR SKTGINELLR D
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