| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3663 |
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| Symbol | |
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| ID | 4029883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4034208 |
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| End bp | 4037108 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637972075 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_578851 |
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| Protein GI | 92119122 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTCG CAACCGAAGC TGCGCGTGCC GAACGTCCGT CTTTGCCTGC TGCGGCCGCG
ATGCCGTCCA GCGAACCCGC GTATCAGGTC ATCCGACGCA ACGGGTCGGT ATCGCCGTTC
GATTCCTCGA AGATCGCCGT CGCGTTGACC AAGGCGTTTC TCGCGGTCGA GGGCAACAGC
GCCGCTGCTT CGCGCCGGGT CCACGACATC GTCACCGAGC TGACCGACCA GATCGTCGCC
AGCCTGACGC GGCGCTCCGA CGCGGGCCGC ACCTTCCACA TCGAGGATAT TCAGGATCAG
GCCGAACTCG CGCTGATGCG GAGCGCGCAT CACAAGGTCG CGCGCGCCTA CGTGCTCTAT
CGCGAGGAGC GCGCACGCGA ACGGGCCAAG GCGCAGGAGT CGAATGCAAA GAAGAGCAAC
GCGGCAGCCG CGACGCCGGC GCTGCGGATG AAGTCGGTCG ACGGGTCGAT GGCGCCCCTC
GACACCAGGC GCCTCGCCGC CGTGGTGGAG GAGGCCTGTG CTGGACTTGA GGGTGTCTCG
GCCGAGGCCA TTCTGACCGA AACCCATCGC AACCTTTATG ACGGCATCAG CGCGGATGAG
TTGGCGTTGG CGCCGATCCT CGCAGCGCGC ACGCTGGTCG AGACCGACCC GGACTACGCC
AAGGCGAGCG CGCGCCTCCT GCTCGACAAG CTGCGCCGCG AGGCGTTGAG CCTCATTGCC
GGGCGACCGG AGCAGGCGAC CCAGGCGGAA ATGACGGGAC GCTACGCGGA GTATTTCCTT
GGCTATGTGC AGACCGGCAT TGAAAACGAA CTGCTCGATC CCGAGATCGG CCGCTTCGAC
CTCGACCGAC TTGCAGCCGC ACTGAAGCCG GAGCGCGACC TCCAGTTCGA CTATCTCGGA
TTCCAGACCC TTTACGACCG TTACTTCCTG CATGTTCGCG GCACCCGTTT CGAACTGCCG
CAGGCGTTCT TCATGCGCGT TGCCTGCGGC CTCGCGCTCC GGGAAATCGA CCGGGAAGAC
AAGGCGATCG CGTTCTACAA TCTGCTCTCG TCGTTCGACT TCATGGCCTC GACGCCGACG
CTGTTCAACG CCGGGACGCA GCGCGCCCAG CTATCATCCT GCTTCCTCAC CACCGTCGCC
GACGACCTCG ACGGCATCTT CAAGGCGATC AAGGACAACG CGCTGCTCTC GAAATATGCC
GGCGGCCTCG GCAACGACTG GACGCGGGTG CGCGGGCTCG GCGCGCACAT CAAGGGCACC
AACGGGGAAA GCCAGGGCGT GGTGCCGTTC CTGAAGGTCG CGAACGACAC CGCGATCGCA
GTCAACCAGG GCGGCAAGCG CAAGGGCGCT GTGTGCGCCT ACCTTGAGAC ATGGCACATC
GACATCGAGG AATTTCTCGA TCTGCGGAAA AACACCGGCG ACGACCGCCG CCGCACCCAC
GACATGAATA CCGCCAACTG GGTGCCGGAT CTTTTCATGC AGCGGGTCGA GGAGGATGGC
GTGTGGACGC TGTTCTCTCC GAACGAGACG CCGGACCTCC ACGATCTCAC CGGCAAGGCC
TTCGCAGAAC GCTACGCCCA CTATGAAGGG AAGGCCGCGC GCGGCGAGAT GCGGGTGACG
AAGCAGGTTC GCGCCGTCGA CCTGTGGCGG CGGATGCTGA CCATGCTGTT CGAGACCGGA
CATCCCTGGA TCACCTTCAA GGATCCGTGC AACCTGCGCT CGCCGCAACA GCATTGCGGT
GTCGTGCATT CCTCAAATCT CTGCACCGAG ATCACGCTCA ACACGTCGAA CACCGAGGTG
GCGGTGTGCA ATCTCGGCTC AGTCAATCTC GTCAACCACC TGCACGACGG CAAGCTCGAC
CATGCGCACC TCGCGCGTAC CGTGAAGACC GCGATGCGGA TGCTCGACAA CGTGCTGAAC
GTGAACTTCT ACACGATCCC GGAGGCGCGG ACCTCGAACC TGCGACACCG GCCGGTCGGA
CTCGGCCTCA TGGGCTTTCA GGATGCGCTC AACATCCTGC GGCTGCCCTA TGCCTGCGAT
GAAGCCGTGT CCTTCGCGGA CGAGAGCATG GAGGCGATTT CGTACTGGGC CATCTCCGGC
TCGGTCGATC TCGCGGCCGA GCGTGGCCGC TATCCCTCGT ATCAGGGGTC GCTGTGGTCG
AAGGGCATCC TGCCGCTCGA TTCGCTTGCG CTCGTCGATG AAGCGCGCGG CGCGCCGATC
GACCTCGACC GTTCCAGCCG TCTCGACTGG GAGGCGCTGC GCCAGCGCGT CATGACCGTC
GGCATGCGCA ATTCGAACTG CATGGCGATC GCGCCGACCG CGACGATCTC CAACATCTGC
GGCGTCTCGC AATCGATCGA GCCCGCCTAT CAGAACCTCT ACGTCAAATC CAACATGTCC
GGCGATTTCA CCGTGGTGAA CGCGCATCTC GTGCGCGATC TCAAGGCGCG CGGGCTATGG
GACGAGGTGA TGATCTCGGA CCTCAAATAC TTCGACGGCG GCCTGAGCCG GATCGACCGC
GTCCCCGACG ATCTCAAGGC GCTCTATGCC ACCGCCTTCG AGATCGACTC GGCCTGGCTG
ATCGACGCCG CGGCGCGCCG GCAGAAATGG ATCGACCAGG CGCAGTCGCT CAACCTCTAC
ATCGCCGATC CGAGCGGGAA GAAGCTCGAC GCGCTCTATC GCCATGCCTG GAAGCGCGGC
CTCAAGACGA CCTATTACCT GCGCTCGCGC TCGGCGACCC ACGTCGAGAA ATCCACCCTG
AAAGTCACCG ACGGCAAACT CAACGCGGTC TCGGCCTCGG TATCGACAGC ACCCTTGAAT
GGTCACGCCG CCAGCGTCGC CGAGAGCGAC GGCTGGAAAG CCTGCCGGAT CGACGACCCC
ACCTGCGAAG CGTGTCAGTA A
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| Protein sequence | MSLATEAARA ERPSLPAAAA MPSSEPAYQV IRRNGSVSPF DSSKIAVALT KAFLAVEGNS
AAASRRVHDI VTELTDQIVA SLTRRSDAGR TFHIEDIQDQ AELALMRSAH HKVARAYVLY
REERARERAK AQESNAKKSN AAAATPALRM KSVDGSMAPL DTRRLAAVVE EACAGLEGVS
AEAILTETHR NLYDGISADE LALAPILAAR TLVETDPDYA KASARLLLDK LRREALSLIA
GRPEQATQAE MTGRYAEYFL GYVQTGIENE LLDPEIGRFD LDRLAAALKP ERDLQFDYLG
FQTLYDRYFL HVRGTRFELP QAFFMRVACG LALREIDRED KAIAFYNLLS SFDFMASTPT
LFNAGTQRAQ LSSCFLTTVA DDLDGIFKAI KDNALLSKYA GGLGNDWTRV RGLGAHIKGT
NGESQGVVPF LKVANDTAIA VNQGGKRKGA VCAYLETWHI DIEEFLDLRK NTGDDRRRTH
DMNTANWVPD LFMQRVEEDG VWTLFSPNET PDLHDLTGKA FAERYAHYEG KAARGEMRVT
KQVRAVDLWR RMLTMLFETG HPWITFKDPC NLRSPQQHCG VVHSSNLCTE ITLNTSNTEV
AVCNLGSVNL VNHLHDGKLD HAHLARTVKT AMRMLDNVLN VNFYTIPEAR TSNLRHRPVG
LGLMGFQDAL NILRLPYACD EAVSFADESM EAISYWAISG SVDLAAERGR YPSYQGSLWS
KGILPLDSLA LVDEARGAPI DLDRSSRLDW EALRQRVMTV GMRNSNCMAI APTATISNIC
GVSQSIEPAY QNLYVKSNMS GDFTVVNAHL VRDLKARGLW DEVMISDLKY FDGGLSRIDR
VPDDLKALYA TAFEIDSAWL IDAAARRQKW IDQAQSLNLY IADPSGKKLD ALYRHAWKRG
LKTTYYLRSR SATHVEKSTL KVTDGKLNAV SASVSTAPLN GHAASVAESD GWKACRIDDP
TCEACQ
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