Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3638 |
Symbol | |
ID | 4031362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4003344 |
End bp | 4005809 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637972050 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_578826 |
Protein GI | 92119097 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCGG CGGATCACGC GAGCGATACG AGAAGCGGCA ACGGAGCGGC AGGACATTCA TCAGTCATCG GCTGGGGCAA GGCGATGATC GGCGTTGCCG CGGTGATGCT GATCCCCGAT TCCGCCGACG CCCAGCCGGC GTCCAGCGCT GAAGATCTTC CGCAGGTTCG CGTTACGGCG CCGAAGCGGC AGGCCAAGAA AAGAACCGTA CACCGTGCGC CGGTACGGGC CGCGCCGGTG CCGTTTGTTG CCGCGCCGAG CAACGTCCAG GTCAATCCTA TCGTCGGCGA CGGGCATGGG GTCACCGGCT ATCAGGCCCC GGCGCAGGCC GGGATTTCCC GCCTTCCAAC CTCGCTCGCC GATACGCCGC AAACCGTCAA CGTGGTGACG CAGCAGGTAC TCCAGGAGCA GCGTCTCCTT AGCATGGAAG ATGCGCTGCG GACGGTGCCG GGCATCACCT TCAGCGCCGG CGAGGGCGGC CAGCAGGGCG ACAGCCCGAT CGTCCGCGGT TTTGCGGCGC GGGGCGACAT GTTCCGCGAC GGCATCCGCG ATCCGGGCTG GTACACGCGT GACCTGTTCA GCGCCGACCG CGTCGAAGTG TACAAGGGGC CGTCGGGATT TGCCTTCGGC CGCGGTTCGA CCGGCGGCGC GATCAACACC GTCTCGAAGT TGCCGCAAGC CACCAACTTC GTCGATGGCA CCGTCAGCGG CGTCACCAGT GGCGGTTATC GCGCCGAGGT CGATGCCGAT GGCAAACAAG GGAATTTGTC CGGCCGCCTC GCGGCGATGT ATCAGGATAT TCCCACCGCC GGTCGCGATC ACATTTTCGC AAAGCGCTGG GGCGTCGCTC CGTCGGTCAA GGCGGAGTTC TCGGAGGATA CCCGCGGGAT CTTCAGCTAC GTCTATCAGG GCGAGGACAG CGTGCCGGAT TACGGGCACC GCTATCTGCC GGCGCCGACC TACAGCCAAA CGACCGGCGC GCTGGCCACC CCCGGTTACT TCGGCAACGG TGCGGCGACC CCGCCGATGC CGGTCCCCCG CCATGTCTGG TACGGCGTGG TGGGTGGGCC GCTGGCTGAC CGCCAACTCA CCGACACCCA CATCGCGACA GCTCGTTTCG AACATGATTT CAACGACAAT TTGAAGATTT CGAACGGGAC GCGATACGTC AGTGTCAACC GCATGGCGCG GCCGACAGCC CCGCGCGGCG AATTGCAGGC CGACAACGCC ACGGCCATCA CGCCGGGCTA TCCAGTTGAA CTGATGACGA TGGGGCGGCA GCACTTCGAG ACGGTGACCA ACAACACGCT GCTCATCAAC CAGACCGACC TGACCGGCAA GTTCTGGACC GGCGGCTGGG AGCATACGTT CGCGGTGGGC GCCGAAGCCG CGCGCGAAAC CCGCGATCAG ATACGCGCTA ATTACTGCGT GCCAGGCGAT CTGGCGTGCC GAACCAGCGC CTTTGCTCCC GTCGATACAT CCTTTGGCGG GCCGAATACC GGGTTCGGCT TGCCGAATTC GACGGTGTCG ACCAACTACG CGGTCTACGG CTTCGATCAG GTCAAGCTCA ACAAATACTT CGAGCTACTC GGGTCGATCC GTTACGACAA CTTCCGTTCG AAATACACCA ATTTCGCGTT GGCGCCCGGA AGCGAGCAGC TTGGCCGGAC CGACGATATG GTTAGCTGGC GCGTCGGCGG GGTCTTCCAT CCGACGTCGA AATCGAGCCT CTATGCTGCC TATGGCGTGT CGTACAATCC TGCGGCTGAA TTCCAGACGC TCGACGCCCG CGACAACAAC GCGGCGAACC CCTTGCTGGC TCCTGAGCGC AACACGACGA TCGAAGTCGG CGCCAAGGCG GATGTGCTTA ACGGCAAGCT GACGCTGAGC GGCGCGGTGT TCCGGATCGA AAAGACCAAT CTGCGTATTC CGATCGATCC GATCGCCGGA AACCTCGCGC TGGTGCTTGG CGGCCTTGCG CGCGTGGACG GTGTCGAGGT GAGTGCCGCA GGCAAGCTCA CCGATCAGTG GGGCCTGTTC GCGGGCTACA GCTATCTCGA CTCCAAGATC GTCAACACGA CTGATCTTTC GCAGTTGGGC CGCCAGCTGC CCAACACGCC GCCGCATAAC TTCTCGCTGT GGTCGACCTA CGACTTCACG CCGCAGTGGA CCGTTGGCGG CGGTGTGACT TATGCAGCAC GTACTTTCGT CAATCCGACG AACACCTCTT ATGTGCCGGA ATACTGGAAG CTCGATCTCA TGACGAGCTA CAAGGTCACC AGGGATTCGC TGCTGCAGCT CAACGTCTAC AACGTGACGG ACGAGCTGTA CTACGGCCAA TACTACCAGG GCCACGCCGT TCCGGCTGCC GGACGAACCG CGATGCTGAC CTACCGCTAT CACTTTACGC CGCCGCCGCC GGTCGCCGAT TATCCGGTGA AGGCTGCGCG CTACGTGAGC AAGTAA
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Protein sequence | MLSADHASDT RSGNGAAGHS SVIGWGKAMI GVAAVMLIPD SADAQPASSA EDLPQVRVTA PKRQAKKRTV HRAPVRAAPV PFVAAPSNVQ VNPIVGDGHG VTGYQAPAQA GISRLPTSLA DTPQTVNVVT QQVLQEQRLL SMEDALRTVP GITFSAGEGG QQGDSPIVRG FAARGDMFRD GIRDPGWYTR DLFSADRVEV YKGPSGFAFG RGSTGGAINT VSKLPQATNF VDGTVSGVTS GGYRAEVDAD GKQGNLSGRL AAMYQDIPTA GRDHIFAKRW GVAPSVKAEF SEDTRGIFSY VYQGEDSVPD YGHRYLPAPT YSQTTGALAT PGYFGNGAAT PPMPVPRHVW YGVVGGPLAD RQLTDTHIAT ARFEHDFNDN LKISNGTRYV SVNRMARPTA PRGELQADNA TAITPGYPVE LMTMGRQHFE TVTNNTLLIN QTDLTGKFWT GGWEHTFAVG AEAARETRDQ IRANYCVPGD LACRTSAFAP VDTSFGGPNT GFGLPNSTVS TNYAVYGFDQ VKLNKYFELL GSIRYDNFRS KYTNFALAPG SEQLGRTDDM VSWRVGGVFH PTSKSSLYAA YGVSYNPAAE FQTLDARDNN AANPLLAPER NTTIEVGAKA DVLNGKLTLS GAVFRIEKTN LRIPIDPIAG NLALVLGGLA RVDGVEVSAA GKLTDQWGLF AGYSYLDSKI VNTTDLSQLG RQLPNTPPHN FSLWSTYDFT PQWTVGGGVT YAARTFVNPT NTSYVPEYWK LDLMTSYKVT RDSLLQLNVY NVTDELYYGQ YYQGHAVPAA GRTAMLTYRY HFTPPPPVAD YPVKAARYVS K
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