Gene Nham_3617 details

Gene Information

• Locus tag: Nham_3617
• ID: 4030387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3983386
• End bp: 3983787
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637972029
• Product: succinate dehydrogenase, cytochrome b subunit
• Protein accession: YP_578805
• Protein GI: 92119076
• COG category: [C] Energy production and conversion
• COG ID: [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit
• TIGRFAM ID: [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0610127
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCCGC TATCCGGTCC GAAGTCGATG CGGACACCGC TATCGCGGGT TCGTAACCTC 
GGCGCAGCCC ATTCCGGAAC CAAGGACTTT TGGCGACAAC GTCTGACCGC GGTCGCCATG 
ATCTTGCTCA TCGTACCGAT GATCGTGGTC ATGATGATCC TGCTTGGCCG CAACCAGGCC 
GGGGCGGCGC AGATTCTCGG CTCGCCGCCG ATCGCCATCA TCATGCTGCT GTTCGTCGTC 
GCCAGCATCT GGCATATGAA GATCGGCATG CAGGTGATCA TCGAGGACTA CGTGCACGAC 
GAGAAAACGA AACTGGCGTC GATCATGGCG AACAACTTCT TCTCCGTCAC GTTGGCGCTG 
GCCGCCGCTT ACGCCATCTT CAAACTGTCA TCCGGAGTTT AG 

 

Protein sequence

MEPLSGPKSM RTPLSRVRNL GAAHSGTKDF WRQRLTAVAM ILLIVPMIVV MMILLGRNQA 
GAAQILGSPP IAIIMLLFVV ASIWHMKIGM QVIIEDYVHD EKTKLASIMA NNFFSVTLAL 
AAAYAIFKLS SGV