| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3603 |
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| Symbol | |
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| ID | 4031536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3960078 |
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| End bp | 3963191 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637972014 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_578791 |
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| Protein GI | 92119062 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0448996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCAT CGCGACCCTT CATTTTGCGG CCAGTGGCAA CCACGCTGCT CATGGTCGCA
ATCATGTTGT CGGGCCTGCT CGCTTTTCGC TTCCTTCCGG TCGCAGCGCT CCCCGAAGTC
GATTACCCGA CCATCCAGGT GCAGACCTTT TATCCCGGCG CCAGCCCCGA CGTCATGACA
TCGTCCGTCA CCGCGCCGCT GGAAGTGCAA CTCGGCCAGA TGCCGAATCT CAACCAAATG
AGTTCGGTGA GTTCCGCCGG CGCATCGGTC ATCACGCTGC AATTCGGCCT CAGCATTTCC
CTCGACGTGG CGGAGCAGGA AGTGCAGGCT GCCATCAATG CAGCCGGTAA TCTGCTGCCC
GCCGACCTGC CGGCGCCGCC GATCTACGCC AAGGTGAATC CGGCCGACGC GCCGATCCTG
ACGCTGGGGT TGACCTCGGC GACGATGCCG CTGACGCAGG TGGAGGATTT CGCCGACACT
CGCCTGGCGC AGAAAATCTC CCAGCTTCCC GGTGTCGGCC TCGTGAGCAT CAGCGGCGGG
CAGCGACCGG CCGTGCGCGT TCGTGCCGAC ATTCGCAAGC TCGCCGCCTA CGGCCTGAAT
ATCGACGATC TCCGTACCAC GCTCGGCAAT GCCAACATCA ATACGCCGAA AGGAAATTTC
GACGGGCCGA TGCGCGCCTA TACGATCAAC GCCAACGATC AAATCAAGAA CGCAGCCGAC
TACAAGTCGT TGATCGTCGC CTACAAGAAC GGTTCTCCGG TACGGCTGAG CGATATCGGC
GATGTGGTCG ATGGCGCGCA GAACGACAAG CTCGGCGCCT GGATGAACAA GGTTCCGGCA
GTCATTCTGA ACATTCAGCG GCAGCCGGGC GCCAATGTGA TTTCCGTGGC GCAGGGGGTC
AAGGATCTGC TGCCGCAGCT CCAGGCCTCG CTCCCCACCG CGATCAACGT CGCCGTTCTC
ACCGACCGCA CCGTCACCAT TCGTGCATCG GTACGGGATG TCGAATACGA GCTTACGCTC
GCGGTGATCC TGGTCGTGCT GGTGATATTC GTCTTCCTGC GCAGCGCGCG GGCGACCCTA
ATTCCGAGCC TCTCGGTGCC GCTTTCGTTA GTCGGCACGC TCGGTGCAAT GTATCTGTTC
GGCTTCAGTC TCAATAATCT GTCCTTGATG GCGCTCACTA TCGCGACCGG TTTCGTGGTC
GACGACGCCA TTGTCGTTAT CGAAAATATT TCGCGCTATA TCGAACAGGG GGAAACACCG
TTGCAGGCTG CCCTGCGCGG CTCGGAACAG ATCGGCTTTA CGATCATCTC CCTCACCGTC
TCGCTGATCG CGGTGCTGAT TCCGCTGCTG TTCATGGGCG ATGTGGTTGG CCGGCTGTTC
CGGGAATTTG CCATCACCCT GTCGGTCACC ATACTCATCT CTGGCGTGGT CTCGCTCACG
CTGGTGCCGA TGGCCTGCGC CAAGCTTCTG AAAGCCGCGG CGGATGATCG CGAGAACCTG
TTCCAGCGCT ACAGCCGCGA AGGCTCCGAT CGGCTGATCG CGGCTTACGG CCGCGCTCTC
AATTGGGTGC TCGATCGCCA GACGTTCGTG CTGCTGGTGG CGCTGGGCAC CTTCGTACTC
ACAGGGGCAC TCTACGTTAT CATTCCCAAG GGGTTCTTTC CGCTTCAGGA CACGGGCGTC
ATCCAGGCGA TTTCCGAAGC GCCGCAATCG GTGTCCTACG CCGCGATGGC GGAGCGGCAA
CAAAAGCTTG CGAGCGCCAT TCTTGAGGAC CCGGACGTCG ACAGCCTGTC CTCGTTCATC
GGCGTGGACG GGACCAATAC GACGCTCAAC AGCGGCCGGA TATTGATCAA TCTCAAACCG
CACGATCTGC GCACATCCAA CATCACAGCG GTGATGCAAC GCCTGAAGGA GCGCGCGGCC
GCGCTCCCCG GCATCACGCT GTATATGCAA CCGGTGCAGG ATCTGACCAT CGAGGGCACC
GTCAGCAGGA CACAGTATCA ATTCGTTCTT CAGGATGCCG ACGCGGCGCA GTTGACCGAA
TGGACCCCCA GGCTAATCGA TCGATTGAAT GCACTTCCGC AGCTTGCCGA CGTCACCAGC
GACATCTCGG CGCAAGGGCT CGCGGTCTTC GTCGATATCG ACCGCGACCA GGCTGCGCGT
TTCGGCATCA CTCCCGCCAC CATCGACAAC GCGCTTTACG ATTCATACGG ACAGCGGATC
GTCTCGACGA TTTTCACGAA CTCCAACCAG TATCGCGTCA TTCTGGAAGC CGATCCGTCG
CTTCAAACGT CGCTGCAATC GCTGTCCGCG ATCTATCTTC CCTCCTCGGT CGGCGGCGCG
CCGGTCCCGC TCTCGGTGCT CGCGAAAATT CGGGAGGAAA CCGCGCCGCT GCAGGTCTCT
CATCTCGGAC AGTTTCCTGC AACCACGATC TCGTTCAACC TTGCTCCGGG CGCGTCGCTG
GGCGAGGCGG TGTCTGCGAT CAAACAGGCG CAGCTCGATG TCGGACTCCC GGCCAGCGTG
ATCAGCAGTT TTCAGGGAGC CGCACTGGCG TTTCAATCAT CGCTCTCAAA TCAGATCTTC
CTGATCTTCG CAGCGATTGT CACCGTCTAC ATCGTGCTGG GTGTTCTCTA TGAGAGCTTC
ATCCATCCGC TCACCATTCT GTCCACGCTT CCCTCGGCCG GAATTGGCGC ACTGCTGGCG
CTGATGCTGG CCGGCCAGGA TCTCACCATC GTCGCGATCA TCGGCATCAT TCTTCTCATC
GGAATCGTAA AGAAGAACGC GATCATGATG ATCGATTTCG CGCTCGATGC CGAACGGAAT
GAAGGCAGGC CGCCGCGCGA GGCGATCTAT CAAGCGTGCC TGTTGCGATT CCGCCCCATC
CTGATGACGA CGATGGCCGC GGTGCTGGGT GCCCTGCCGC TGATGCTCGG CACCGGCGCC
GGCTCCGAAC TGCGGCACCC CCTTGGTATC TCCATCGTCG GTGGCCTGCT GGTCAGCCAG
TTGCTGACCT TGTTCACCAC ACCCGTCATC TATCTCTGGT TCGATCGCCT CTCGTTGCGC
ATGTCCGGGC AGTCATCCAG CAGCCGTCCG ACGGCAGACG GAATCGAGCC ATGA
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| Protein sequence | MSPSRPFILR PVATTLLMVA IMLSGLLAFR FLPVAALPEV DYPTIQVQTF YPGASPDVMT
SSVTAPLEVQ LGQMPNLNQM SSVSSAGASV ITLQFGLSIS LDVAEQEVQA AINAAGNLLP
ADLPAPPIYA KVNPADAPIL TLGLTSATMP LTQVEDFADT RLAQKISQLP GVGLVSISGG
QRPAVRVRAD IRKLAAYGLN IDDLRTTLGN ANINTPKGNF DGPMRAYTIN ANDQIKNAAD
YKSLIVAYKN GSPVRLSDIG DVVDGAQNDK LGAWMNKVPA VILNIQRQPG ANVISVAQGV
KDLLPQLQAS LPTAINVAVL TDRTVTIRAS VRDVEYELTL AVILVVLVIF VFLRSARATL
IPSLSVPLSL VGTLGAMYLF GFSLNNLSLM ALTIATGFVV DDAIVVIENI SRYIEQGETP
LQAALRGSEQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF REFAITLSVT ILISGVVSLT
LVPMACAKLL KAAADDRENL FQRYSREGSD RLIAAYGRAL NWVLDRQTFV LLVALGTFVL
TGALYVIIPK GFFPLQDTGV IQAISEAPQS VSYAAMAERQ QKLASAILED PDVDSLSSFI
GVDGTNTTLN SGRILINLKP HDLRTSNITA VMQRLKERAA ALPGITLYMQ PVQDLTIEGT
VSRTQYQFVL QDADAAQLTE WTPRLIDRLN ALPQLADVTS DISAQGLAVF VDIDRDQAAR
FGITPATIDN ALYDSYGQRI VSTIFTNSNQ YRVILEADPS LQTSLQSLSA IYLPSSVGGA
PVPLSVLAKI REETAPLQVS HLGQFPATTI SFNLAPGASL GEAVSAIKQA QLDVGLPASV
ISSFQGAALA FQSSLSNQIF LIFAAIVTVY IVLGVLYESF IHPLTILSTL PSAGIGALLA
LMLAGQDLTI VAIIGIILLI GIVKKNAIMM IDFALDAERN EGRPPREAIY QACLLRFRPI
LMTTMAAVLG ALPLMLGTGA GSELRHPLGI SIVGGLLVSQ LLTLFTTPVI YLWFDRLSLR
MSGQSSSSRP TADGIEP
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