Gene Nham_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3579 
SymbolrpsP 
ID4030907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3937487 
End bp3937819 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content68% 
IMG OID637971991 
Product30S ribosomal protein S16 
Protein accessionYP_578768 
Protein GI92119039 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.41568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCG TGATCCGCCT CGCCCGTGCC GGCACCAAGA AGCGGCCGGT CTATCATGTC 
GTCGTCGCCG ATTCGCGCTA TCCGCGCGAC GGCCGTTTCA TCGAGCGGCT CGGCTACTTC
AACCCGCTGA TGCCGAAGGA CAATGCCGAC CGGCTCAAGA TCGACCTCGA CAAGGTCAAG
GCCTGGCTCG CCAAGGGCGC GCAGCCGTCC GACCGCGTGG CGCGTTTCCT CGATGCCGCC
GGCGTCAAGA AGCGCACGGC GCGCAACAAC CCGGAGAAGG CCGTGCCGCG CAAGGAGCGC
AAGGCGCAGG CCGAAGCCGC CGCGAAGTCC TGA
 
Protein sequence
MPVVIRLARA GTKKRPVYHV VVADSRYPRD GRFIERLGYF NPLMPKDNAD RLKIDLDKVK 
AWLAKGAQPS DRVARFLDAA GVKKRTARNN PEKAVPRKER KAQAEAAAKS