Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3578 |
Symbol | |
ID | 4030906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3935731 |
End bp | 3937266 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971990 |
Product | signal recognition particle protein |
Protein accession | YP_578767 |
Protein GI | 92119038 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.715062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGACA ATCTGTCGGA AAGGCTCGGT GGCATTCTTG ATCGGCTGAC GCGGCGCGGC GCGCTGACGG AAGCCGATGT CGATGCCGCC ATGCGCGAGG TGCGCCGGGC GCTGCTCGAG GCCGACGTCT CGCTCGATGT CGTCAGAAGC TTTACCGACA AGGTCCGCGA GCAGGCGATC GGCGCCACCG TCGTCAAATC GGTGACGCCG GGCCAGATGG TGGTGAAGAT CGTCCATGAC GAGCTGATCG CCACGCTCGG TGCCGACGGC CAGACCATCG ACCTCAATGG GGTGCCGCCG ATCACCATCA TGATGGTCGG CCTGCAGGGC TCGGGCAAGA CCACCACGAC AGCAAAGCTG GCGCGACGGC TGACCGAGCG CGACAAACGT AAAGTCCTGA TGGCCTCGCT CGACATCTAT CGGCCGGCAG CGATGGAGCA GCTCGCGGTG CTCGGCCGCG ATCTCGATAT CCAGACGCTG CCGATCCTCG CGGGCCAGAA GCCCGAGCAG ATCGCGCGCC GCGCGCTGGA AGCCGGCAAG CTTGGCGGTT ACGACGTGGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT CGACAACGAA ATGATGTCCG AGGCGGCGAA CATCAAGGCC GCCGCCCGCC CGCACGAAGT GCTGCTGGTT GCGGACTCGC TGACCGGCCA GGACGCGGTC AACCTCGCGC GCTCGTTCGA CGAGCGCGTC GGCCTCACCG GCATCGTGCT GACTCGAGTG GACGGCGACG GCCGCGGCGG CGCCGCGCTA TCGATGCGTC AGGTCACCGG CAAGCCGATC AAGCTGATCG GTACCGGCGA AAAAACCGAC GCGCTGGAGG ATTTCCATCC CTCCCGCATC GCCGGCCGCA TCCTCGGCAT GGGCGACGTG GTCACGCTGG TCGAAAAGGC CGCCGCCAAT ATCGACGCCG AAAAAGCCGC GCGCACGACC GAGAAGATGC GCAAGGGCCA GTTCGACCTC AACGACATGC GCGAGCAGTT GTTGCAGATG ACGAAAATGG GCGGCGTATC CGGCCTGATG GGCATGATGC CCGGCGTCGC CAAGATGAAG AACCAGATCG CCGCAGCCGG TCTCGACGAC AGGATTATCA AACGTCAGGT CGCGGTGATC GATTCGATGA CGCGACAGGA GCGCAAGCAT CCCGATATCC TGAAGGCCAG TCGCAAGCGG CGCATCGCTG CCGGCGCCGG CCAGAAGGTC GAGGAGATCA ACAAGCTGCT CAAGATGCAT CGCAGTATGG CCGACATGAT GAAGATGATG GCAACCGGCA AGCGCGGCGC GCTCGCCGGC ATCGCGCAGG CGATGGGCTT TGGAGGGGGC ATGCCGAGCC CCGAACAGAT GAAAGCGCTG GCGGAAAAAA TGCCGAAAGG CGCCGACGGC CTGCCGCAAA TGCCGAAGGA TCTGCCGGCG GGATTGCGCG GCGGCCTACC TAACCTTCCC GGCCTCACCG GACTTGGCGG CAAGCCGACG CTGCCCGGCC TCGGCTTTCC CCGGAAGAAG AAATGA
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Protein sequence | MFDNLSERLG GILDRLTRRG ALTEADVDAA MREVRRALLE ADVSLDVVRS FTDKVREQAI GATVVKSVTP GQMVVKIVHD ELIATLGADG QTIDLNGVPP ITIMMVGLQG SGKTTTTAKL ARRLTERDKR KVLMASLDIY RPAAMEQLAV LGRDLDIQTL PILAGQKPEQ IARRALEAGK LGGYDVVLLD TAGRTTLDNE MMSEAANIKA AARPHEVLLV ADSLTGQDAV NLARSFDERV GLTGIVLTRV DGDGRGGAAL SMRQVTGKPI KLIGTGEKTD ALEDFHPSRI AGRILGMGDV VTLVEKAAAN IDAEKAARTT EKMRKGQFDL NDMREQLLQM TKMGGVSGLM GMMPGVAKMK NQIAAAGLDD RIIKRQVAVI DSMTRQERKH PDILKASRKR RIAAGAGQKV EEINKLLKMH RSMADMMKMM ATGKRGALAG IAQAMGFGGG MPSPEQMKAL AEKMPKGADG LPQMPKDLPA GLRGGLPNLP GLTGLGGKPT LPGLGFPRKK K
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