| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3574 |
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| Symbol | |
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| ID | 4030902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3931578 |
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| End bp | 3932849 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971986 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_578763 |
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| Protein GI | 92119034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCG ACGTCGTCAC CTTCGGCTGC CGGCTCAATG CCTTCGAATC CGAAGTCATC
CGCCGCAATG CGGACGATGC CGGCCTTGAC GACGTCGTCA TCGTCAACAC TTGCGCCGTC
ACCAACGAGG CGGTGGCGCA GGCTCGGCAA TCGATCCGCA AATTGAAGCG CGAGCGGCCG
TCGGCGCGCA TCGTCGTCAC CGGCTGCGCG GCGCAGATCG AGCCGACGAT GTTCGCGCAG
ATGCCCGAAG TCGATCGCGT GATCGGCAAC GACGACAAGA TGCGCGGTGA CACCTGGCGC
GACGCGCGGA CCGCATTCGC CGCAGTGGCC GATTTCGGGA TCGCGAACGA GGAAAAAATC
GCCGTCGCCG ACATCATGGC GGTGACCGAG ATGGCGCCGC ATCTCGTCGA GGGCTTTCAA
GGCGGCCTGC CCCGCGCCTT CGTGCAGGTG CAGAACGGTT GCGACCATCG CTGCACCTTC
TGCATCATTC CTTTCGGGCG CGGCAATTCG CGCTCGGTGC CGATGGGCGC GGTTGTCGAT
CAGGTGCGCG TGCTCGTCGA GGCCGGTCAT GCCGAGATCG TGCTGACCGG CGTCGATCTC
ACGAGCTACG GCGCCGATCT GCCGGGTGGG CCGAGACTGG GCGGCTTGAT CAAGCGGATC
CTGCGGCATG TGCCGGAGAT GAGGCGGCTG CGAATCTCGT CGATCGATTC GATCGAGGCG
GATCGGGATT TGCTTGATGC GGTCGCGAAC GAGGAGCGGC TGATGCCGCA TCTGCATCTG
TCGCTGCAAT CCGGCGACGA CATGATCCTG AAGCGGATGA AGCGGCGGCA TTCGCGTCGG
GACGCCATCG ACTTCTGTGC GCAGGTGCGG CGGTTGCGGC CGGACATCGC CTTCGGTGCC
GACATCATCG CCGGTTTCCC GACCGAGACC GATGACATGT TCGCGCGGTC GCTCGATCTG
GTCGCGGACT GCGATCTCAC CTTCCTGCAT GTGTTTCCCT ATTCGCCGCG TCCGGGGACG
CCGGCGGTGC GGATGCCACC GGTCGCGGGC GAGGTCATCA AAGACCGCGC CGGGCAGTTG
CGCGCCGCCG CCGGAGCCGC GCTGCGGCGG CGGCTTGCCG CGGACATCGG CGCAACGCGT
CAGGTGTTGA TCGAAAGCGC CACTCAGGGC CGCACCGAGC ATTTTGTCCC GGTCGCGATT
GCGGGAGAGA CGCCCGGCGC GGTGCGAACG CGGATGATTT CAGGGCACGA TGGTGCGCGA
CTGCTGGTGT GA
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| Protein sequence | MTIDVVTFGC RLNAFESEVI RRNADDAGLD DVVIVNTCAV TNEAVAQARQ SIRKLKRERP
SARIVVTGCA AQIEPTMFAQ MPEVDRVIGN DDKMRGDTWR DARTAFAAVA DFGIANEEKI
AVADIMAVTE MAPHLVEGFQ GGLPRAFVQV QNGCDHRCTF CIIPFGRGNS RSVPMGAVVD
QVRVLVEAGH AEIVLTGVDL TSYGADLPGG PRLGGLIKRI LRHVPEMRRL RISSIDSIEA
DRDLLDAVAN EERLMPHLHL SLQSGDDMIL KRMKRRHSRR DAIDFCAQVR RLRPDIAFGA
DIIAGFPTET DDMFARSLDL VADCDLTFLH VFPYSPRPGT PAVRMPPVAG EVIKDRAGQL
RAAAGAALRR RLAADIGATR QVLIESATQG RTEHFVPVAI AGETPGAVRT RMISGHDGAR
LLV
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