Gene Nham_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3490 
Symbol 
ID4029343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3839216 
End bp3839773 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID637971901 
ProductHNH endonuclease 
Protein accessionYP_578679 
Protein GI92118950 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGCGC ATGTCTCCCA AGGCGGCTGG CCGGTGCTGG TCCTGAATGC GGACTTCCGG 
CCGCTGAGTT ACTATCCGTT GTCCCTTTGG TCGTGGCAGG ACGCGATCAA GGCGGTCTTC 
CTTGAGCGTG TCAATATCGT CGAACATTAC GACCGAGCCG TACGCAGCCC CTCGTTCGAA 
ATTCAGCTCC CGAGCGTGGT GTCGCTGAAA TCCTTCGTCA AACCGTCGAC CCATCCCGCC 
TTCACCCGCT TCAACGTGTT CCTGCGCGAC AGGTTCATGT GCCAGTACTG CACGGCGAGC 
GAGGACCTCA CCTTCGACCA CATCATCCCG CGCAGCAAGG GCGGCCAGAC CACGTGGGAT 
AACGTCGTCG CAGCCTGCTC GCCGTGCAAT CTGCGCAAGG GAAACCTGAC GCCGCGTCAG 
GCGGGGATGT TTCCGCGCCA GGCGCCGTTC GCGCCGACCG TGCATCAACT GCATCGCAAC 
GGCAGGCTGT TCCCGCCGAA CTATCTGCAC GATAGCTGGC TGGATTATCT CTATTGGGAT 
ACCGAGCTCG ATCCGTAA
 
Protein sequence
MNAHVSQGGW PVLVLNADFR PLSYYPLSLW SWQDAIKAVF LERVNIVEHY DRAVRSPSFE 
IQLPSVVSLK SFVKPSTHPA FTRFNVFLRD RFMCQYCTAS EDLTFDHIIP RSKGGQTTWD 
NVVAACSPCN LRKGNLTPRQ AGMFPRQAPF APTVHQLHRN GRLFPPNYLH DSWLDYLYWD 
TELDP