| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3484 |
|---|
| Symbol | |
|---|
| ID | 4029337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3833465 |
|---|
| End bp | 3834358 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637971895 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_578673 |
|---|
| Protein GI | 92118944 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGACATA TCCGCTACGT CTACAGGGTC GGGACGGATG CCTTCTACAC GTTCCTTGCC
GACGATGGCT GGGCGATCGC GAGCCATATC GCGCTATCCG CGCTGATGGC GCTGTTTCCG
TTTCTTATCG TCCTGACATC GCTGGCGGGC TTCCTGGGGT CCAAGGGGCT TGCCGATCAG
GCGGCCGAAC TGATGATCCA GATCTGGCCG GATCAGGTCG CCAACGCGTT GTCCGGCGAA
ATCCATGACG TGCTGACGAC GACGCGCCGC GATGCGCTGA CCGTCGGCGC GGTTCTCGCG
GTCTACTTCG CGTCGAACGG CGTCGAAAGC CTGAGGGTCG CGCTCAACCG CGCCTATGCG
GTGATCGAGC CGCGCCGCTG GTACTGGCTG CGGCTGGAAT CGATCGGCTA TACGCTGGTT
GCCGCGGTGA CGGCGCTGGC GATGGCGTTC CTGATCGTGC TCGGTCCGCT GATCATAGCC
GCCGCGAAGC GCTACATCCC GCTGATCGTC GAATCGAATG AGAGCCTGCT CAACATCGCC
CGCTACGGCA TCACCGTCAT TGCGATGTTC ATCGCGCTCG TGATCCTGCA CGCGTGGCTG
CCGGCGGGTC GGCGATCCTT CCTGCAAATC ATCCCCGGCA TCATCTTCAC CATGCTGGCG
TCGCTGGCCT CGGGCATCGG CTTCGGTCTT TATCTTGCAC GCTTCGCCAA CAACTACGTC
ACAATGTATG CGGGCCTGGC CTCGGTCGTC ATCGCACTGG TGTTTCTCTA CTTCATCGCC
GCGATCTTCG TATTCGGCGG CGAATTGAAC GCGGCCATCA TCAAGTCGCG GCTGCCGCGC
GGCGTTTCGC TTCAAGCAGC GCAGTCGCTA GAGCCCGCGG AGAAACAGGC TTGA
|
|---|
| Protein sequence | MRHIRYVYRV GTDAFYTFLA DDGWAIASHI ALSALMALFP FLIVLTSLAG FLGSKGLADQ
AAELMIQIWP DQVANALSGE IHDVLTTTRR DALTVGAVLA VYFASNGVES LRVALNRAYA
VIEPRRWYWL RLESIGYTLV AAVTALAMAF LIVLGPLIIA AAKRYIPLIV ESNESLLNIA
RYGITVIAMF IALVILHAWL PAGRRSFLQI IPGIIFTMLA SLASGIGFGL YLARFANNYV
TMYAGLASVV IALVFLYFIA AIFVFGGELN AAIIKSRLPR GVSLQAAQSL EPAEKQA
|
|---|
| |