Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3479 |
Symbol | |
ID | 4029332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3829590 |
End bp | 3830471 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637971890 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_578668 |
Protein GI | 92118939 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCAA TGATCAGAAA AGTCGGCGTG ATCGGTGCGG GTCAGATGGG CAACGGTATT GCGCATGTGG CGGCCCTCGC CGGGCTCGAC GTGGTGCTCA ACGATCTTTC CGCCGATCGG CTGAAGTCGG CCATGGCCAC CATCAATGGC AACCTGTCGC GTCAGGTGTC GAAGAAGATC ATCACCGAGG ATGCCCACCA GAAAGCGCTG GCGCGGATTG GACAAACGGA CGCTCTCGAC GGGCTTGCCG ATTGCGATCT GGTGATCGAG ACCGCCGTCG AGAAGGAGGA GGTCAAGCGC AAGATCTTTC ACGATCTGTG CGCGGTGCTG AAGCCCGAGG CCATTATCGC CTCGAACACG TCATCGATCT CGATTACGCG GCTTGCCGCG TCCACCGATC GCCCGGAGAA GTTCATCGGC ATTCACTTCA TGAATCCGGT GCCGCTGATG GAACTGGTCG AGCTGATCCG TGGCATCGCG ACCGGTGATG CGACCTTCGA GGCGGCCAAG GAATTCGTCA CCGGACTCGG CAAGCAGATC GCCGTGTCCG AGGATTTCCC GGCCTTCATC GTCAACCGCA TTTTGCTGCC GATGATCAAC GAGGCGATCT ACACGCTGTA CGAAGGCGTC GGCAATGTCG AGGCGATCGA TGTCGCCATG AAGCTCGGCG CGCACCATCC GATGGGACCG CTCGAGCTCG CTGATTTCAT CGGTCTCGAC ACCTGCCTGT CGATCATGCA GGTGCTGCAT GAAGGGCTCG CCGACTCCAA GTACCGGCCC TGTCCGCTGC TGGTGAAGTA CGTCGAGGCC GGATGGCTCG GCCGCAAGAG CCAGCGCGGC TTCTACGACT ATCGCGGCGA AAAACCGGTT CCGACGCGCT GA
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Protein sequence | MAAMIRKVGV IGAGQMGNGI AHVAALAGLD VVLNDLSADR LKSAMATING NLSRQVSKKI ITEDAHQKAL ARIGQTDALD GLADCDLVIE TAVEKEEVKR KIFHDLCAVL KPEAIIASNT SSISITRLAA STDRPEKFIG IHFMNPVPLM ELVELIRGIA TGDATFEAAK EFVTGLGKQI AVSEDFPAFI VNRILLPMIN EAIYTLYEGV GNVEAIDVAM KLGAHHPMGP LELADFIGLD TCLSIMQVLH EGLADSKYRP CPLLVKYVEA GWLGRKSQRG FYDYRGEKPV PTR
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