Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3419 |
Symbol | |
ID | 4033242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3765653 |
End bp | 3766795 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971830 |
Product | ornithine decarboxylase |
Protein accession | YP_578609 |
Protein GI | 92118880 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.268803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAC GCATTCAGGA ATTCCTGCGC AACCGCCGCA GCGAAGGCAA CGACACCGAG CCCTGCCTCG TGGTCGATCT CGACGTCGTG CGCGACAACT ACCAGACCTT TGCGAAGGCG TTGCCCGATT CGCGCGTGTT CTACGCGGTG AAGGCCAACC CGGCGCCCGA GGTGCTGAGC CTGCTGGCCT CGCTCGGCTC GTGCTTCGAC ACCGCGACCG TCGCCGAGAT CGAAATGGCG CTGGCCGCCG GTGCGACGCC GGACCGCGTC TCCTTCGGCA ACACCATCAA GAAGGAGCGC GACATCGCGC GTGCCTACGC GCTCGGTATT CGCCTGTTCG CAGTGGATTG CACCGCCGAG GTCGAGAAGA TCGCACGCGC CGCTCCCGGT GCGAAGGTGT TCTGCCGCAT CCTGTACGAT TGCGCCGGTG CCGAGTGGCC GCTGTCGCGC AAGTTCGGCT GCGACCCGGA AATGGCGGTC GATGTGCTCG ACCTCGCCAA GCGCCTGAGC CTCGAGCCGG TCGGCATCTC GTTCCATGTC GGCTCGCAGC AACGCAAGGT GAAGGCGTGG GACCGTGCGC TGGCGATGGT CTCGCAAGTA TTCCGTGACT GCGCCGAGCG CGGGATCAAC CTGACCATGG TCAACATGGG CGGCGGCTTC CCGACCAAGT ACCTCAGGGA CGTTCCGCCG GTCGTGCAGT ACGGCCGGTC GATCTTCCGC GCGCTGCGCA AGCACTTCGG CAACCAGATC CCGGAGACCA TCATCGAGCC GGGCCGCGGC ATGGTCGGCA ACGCCGGCGT GATCGAGACG GAAGTCGTTC TGATCTCCAG AAAGAGCGAC GACGACGAGA ACCGCTGGGT CTATCTCGAC ATCGGCAAGT TCAGCGGCCT TGCCGAAACC ATGGACGAGT CGATCCGCTA CGCCATCAGG ACACCGCATG ACGGCGCCGA GATGACGCCG TGCGTGCTGG CGGGTCCGAC CTGCGACTCG GCCGACGTGC TCTACGAGAA GCAGCCGTAT CCGCTGCCGG TGACGCTCGA GATCGGCGAC AAGCTGCTGA TAGAGGGCAC CGGCGCCTAT ACGTCGACCT ACTCGTCAGT GGCCTTCAAC GGCATCCCGC CGCTGAAGAC GTATCACATC TGA
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Protein sequence | MTERIQEFLR NRRSEGNDTE PCLVVDLDVV RDNYQTFAKA LPDSRVFYAV KANPAPEVLS LLASLGSCFD TATVAEIEMA LAAGATPDRV SFGNTIKKER DIARAYALGI RLFAVDCTAE VEKIARAAPG AKVFCRILYD CAGAEWPLSR KFGCDPEMAV DVLDLAKRLS LEPVGISFHV GSQQRKVKAW DRALAMVSQV FRDCAERGIN LTMVNMGGGF PTKYLRDVPP VVQYGRSIFR ALRKHFGNQI PETIIEPGRG MVGNAGVIET EVVLISRKSD DDENRWVYLD IGKFSGLAET MDESIRYAIR TPHDGAEMTP CVLAGPTCDS ADVLYEKQPY PLPVTLEIGD KLLIEGTGAY TSTYSSVAFN GIPPLKTYHI
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