Gene Nham_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3399 
Symbol 
ID4030858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3742114 
End bp3743157 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID637971810 
Producthypothetical protein 
Protein accessionYP_578589 
Protein GI92118860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.274598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCGA GCGCCGAATC TCCAGAACTT GCACCGGAGC AGGAATTGTC TGCGCCGCCG 
CCCGACGACA TCAAGCTCGA GGCGCCGAAG CTGGAAATAC CCCGGATCGA GCCCAAGGTT
GAAGCTGAGG CTCCGAAGGC GGAAGCACCG CGGATCGAGT CCGAGGTTGA GGCTGAGGCT
CCGAAGGTGG AAGCACCGCG GGTCGAGTCC AAGGTTGAGG CCGACGCTCC GAAGGCGGAG
GCACCCCGGA TCGAGCCTAA GGTTGAGGCT GAAGCTCCGA AGGCGGACGC TCTGCGAGAA
ACCGGCAAGA TCATGATCGT GGCGCCGTCA CGCGACCAAT CATGGGATCG CGCGACCATC
GATCAGGGCC CTGCGGCAGC CAGCGGTGCG CAGGCGTCGA GCCGGTTCGG CAAGCGGCGT
CTCGCCGCAA TTGCGGCGGT CGCGGTGTTG GCGGCGATTG CCGGTGCGAT CGGCGGCTCG
CTCGCGACAT CCGGCCTCGG CCACGGCGTC GCCGGTGAAC AGTCGTCGGC GATGGCGAGC
CGCACCCAGG CCATGGAGGC CACGATCACG CGGCTGGAGT CCGAAGTTGC CACGCTGAAG
ACGGGCATCG ATCGCTCCGC CAAGGGCGAG GCCGGTCAGT TCGCCAAGGT CAACGATCGT
CTGGACAAGG TCGAAAAGGC GCATGCCGAG TCGGCGGCGA AGTTGACAAA GCTCAATGAG
ACGCTGGACA GGCAGCGTGT GTCCTCCTCC GCGTCGGTTG CCGCTCCGGC CGCCGCCGCG
ACGAACGTGA CGGGGTCGAT TCCAACTGTT GCCACGCCGG TGCCGCTGCC GGCGGCGAAG
CCGGCAATAG CGCGTCTGCC CGCGGTCGAG GGCTGGGTAT TGCGCGACGT CGCCAACGGC
GGTGCGCTGA TAGAAGGGCG TGGCGGTATC TACGAGGTCT ATGCCGGCGA TCCGGTGCCC
GGGCTAGGCC GCGTCGATGC AATCCGCAAG CAGGACGGTC GCTGGGTCGT CGTCACCAGC
AGAGGTCTGG TGGTCTCGCG CTGA
 
Protein sequence
MSSSAESPEL APEQELSAPP PDDIKLEAPK LEIPRIEPKV EAEAPKAEAP RIESEVEAEA 
PKVEAPRVES KVEADAPKAE APRIEPKVEA EAPKADALRE TGKIMIVAPS RDQSWDRATI
DQGPAAASGA QASSRFGKRR LAAIAAVAVL AAIAGAIGGS LATSGLGHGV AGEQSSAMAS
RTQAMEATIT RLESEVATLK TGIDRSAKGE AGQFAKVNDR LDKVEKAHAE SAAKLTKLNE
TLDRQRVSSS ASVAAPAAAA TNVTGSIPTV ATPVPLPAAK PAIARLPAVE GWVLRDVANG
GALIEGRGGI YEVYAGDPVP GLGRVDAIRK QDGRWVVVTS RGLVVSR