| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3359 |
|---|
| Symbol | |
|---|
| ID | 4032739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3698169 |
|---|
| End bp | 3698948 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637971769 |
|---|
| Product | phage-encoded protein-like |
|---|
| Protein accession | YP_578550 |
|---|
| Protein GI | 92118821 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3646] Uncharacterized phage-encoded protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCCG TAGTATCCGC GCACAGCCAG TCATCGACTG TCCCGGCGCT TCACCTTCCA
GCCACTGCCG CTCAACCCAG CCCGTTCGCC ACCGGCGCCG CGCCGACTAT GTCGAGCCGC
GAGATCGCGG ATCTGGTCGA GAAGCGCCAC GACAACGTCA AGCGCACCAT CGAAACCCTT
GTCGAACGCG GCGTAATCGT CCGTCCTCAA TTTGAGGATG AACATTCCAC CGATGCGCTG
GGTCGTTCCC GGACGGAACG CGTCTACCGG ATCGGCAAGC GCGACAGCTA CGTGATCGTC
GCGCAGCTTT CTCCGGAGTT CACGGCTCGC CTCGTCGACC GATGGCAGGA GCTGGAGACG
CAGGCGAGCC GCCCGGCCCT GCCTGCCAAC TACGCCGCCG CCCTGCGCGA ACTCGCCAGC
ACCGTCGAAG TCGTCGAACA GCAGCAGGCT CTGATCTCAG AGCAGCAGCC GAAGGTCGAG
TTTTACGACC AGTTCGTCAA AGCCGATGGT TTGCTTGGGT ATCAGGAAGC CGGCACTGCC
GCCGGCTGCT ATCCGAACAA GTTCTGCAAC TGGTTGAAGA TCGACCACCT GTTTTACCGC
GGCAAAAAGC TGATGCCGCG ATCACAGTTC GTCCGCCGTG GTCTCTTTGA GATCCGGCCC
GAGTTAGACG CCGATGGCGA ATCTCACCTC CGAGGCTGGG TCACGGCCAA GGGCGTGGAG
CATTTCGCGA AACATGCTCC AGATAACATC CGGATCACCT CTCGCGAGGT GAAGCCGTGA
|
|---|
| Protein sequence | MRPVVSAHSQ SSTVPALHLP ATAAQPSPFA TGAAPTMSSR EIADLVEKRH DNVKRTIETL
VERGVIVRPQ FEDEHSTDAL GRSRTERVYR IGKRDSYVIV AQLSPEFTAR LVDRWQELET
QASRPALPAN YAAALRELAS TVEVVEQQQA LISEQQPKVE FYDQFVKADG LLGYQEAGTA
AGCYPNKFCN WLKIDHLFYR GKKLMPRSQF VRRGLFEIRP ELDADGESHL RGWVTAKGVE
HFAKHAPDNI RITSREVKP
|
|---|
| |