| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3257 |
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| Symbol | |
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| ID | 4029718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3590249 |
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| End bp | 3592597 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971669 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_578451 |
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| Protein GI | 92118722 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.393029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTTC CTTCCAATCG TTTTCTCGCA ATCGCGCGCC TCGGCGTCGT GTCGCTTCCA
GTCCTTGGCG TCATGGCGAT GCCCGATGAA ATTTCGGCTC AGACCGCCCT GCCCGGGATT
GTGGTCAACG CGCCCAGTCC GATCGTGCAC CGCGCACGGC CTCATCAGGC GAGGCCTGCG
CGCACAGTCC GCCGCGGCAC GACGACACGC CCATCCGCCG CCCCGCAGCC CGAGGTAGCC
AGCGCGCCGA CGCCGCCATC GCCGCCCCCC GCCAACTTGC CCGGCACGTT ACCCATCGTG
ACCGATCAAT TCGCGACCGT GACCGTGGTC CCCAGCGACG AGATTCGGCG CAACGGGGCA
GCGACGCTGG GCGACCTGCT CAACAACAAG CCGGGCATCA CCGGCTCCTC GTTCGCGCCG
GGCGCTTCGA GCCGACCCAT CATTCGCGGG CTCGACGTCA ATCGCGTCGG CATCGTGGAG
AACGGCATCG GGAGCAATGG CGCGTCCGAT CTCGGCGAGG ACCATTTCGT GCCGATCGAT
CCGCTTTCGA CCAACCAGGT CGAGGTCATC CGCGGCCCGG CCACGCTGCG CTACGGCTCG
ACGGCGATCG GCGGCGTCGT CAGCGCCAGC AACAACCGCA TTCCCGAAAC CTCGCCGTGC
GCGCCGCCGC TGACGACGCA GACCTACGGC TACGCCGTCA AGGCGCCGCA ACTGTCGACG
CCCCCCGGCT GCGTGAACTT CGAAACCCGT GGAGCATTGT CGAGCGTGGA CAATGGCCGT
GAAGGCGGGG TTCTGCTCGA TGCCGGCGGC GGCGGTTTCG CCATCCATGC TGACGCCTTC
GCGCGGCGGA CCGAGGACTA TGCGATCCCC GGCGGCGTGC AGAAAAATAC CGCGACCGAC
TCGAACGGCG GCTCGGTCGG CGGCTCCTAC CTGTTCGACG GCGGGTTCGT CGGCGCGGCG
ATCACCCAGA ACAACAGCCT GTACCACATC CCCGGAAAGG AAGGCGAAGA GTTCGGCACC
CGGATCGACG CGCATCAGAC CAAGTTCACG GCAAAGGGCG AGTACCGCCC CGACGCGGCG
GCGATCGACG CCATCCGGTT CTGGCTCGGC GCGACCGACT ACAAGCACAA TGAACTCGGC
CTCGCCGACG CGGCCGATCT ATCCAGCGAC GGCGTTCGCC AGACCTTCAC CAACAAGGAG
CAGGAAGGCC GGATGGAGGT CCAGCTCGCC CCGTTCAACC TGCGCTTCGC TGCCCTGACG
ACCGCGATCG GCGTCCAGGC GTCGCATCAG GAACTGACGG CTCCGGGCCC GTCCGATCCA
TTCAGCCCGC TCAACGGTCT ATGGGATCCG AACAGCAACG GCCGGCTCGC CGGCTATATC
TTCAACGAGT TCAAGTTCAG CGATACGACC AAGGCACAAG TCGCCGGCCG GATCGAACAC
GTGAACCTCA ACGGTTCGAC TCCCAGCGTC ATCCCCGAAC TGTTCGACCT CGCCGCCGAT
CCGGGCGCGA TCGGCGTCGC AACGCCGCGG GCCCTGAACT TCACGCCGGC AAGCGCCAGT
GTCGGTCTGA TTCAGAATCT GCCCTGGAAT CTCGTGGCCA GCCTGACCGG GCAATACGTC
GAACGCGCGC CAAAGCCGGC CGAATTGTTC TCGCGCGGTG CGCATGATGC GACGGAAACC
TTCGACATCG GCAGTCCGAA CCTCGGCATC GAGACCGCAA AGTCGGTCGA GGCGGGATTG
CGCCGTGCGA CCGGACCGCT GCGATTCGAA CTGACCGGCT ACTACACGCG GTTCAACGGC
TTCATCTACC GGCGTCTGAC CGGCAACACC TGCGACGAAA CGGCGTGCGC AGCCGGCCCG
GGTCTGGAAT TGAACCAGGC CATCTACTCC CAGACCGATG CCACTTTCCG CGGCGGCGAA
TTCCAGTTTC AATATGATGT CTTGCCGATC TGGAACGGCC TGTTCGGCAT CGAGGGACAG
TACGACATCG TCCGCGCGAC CTTCACGGAC GGCACCAACG TGCCGCGAAT TCCGCCGCAG
CGCGCAGGCG GAGGCGTCTA CTACCACGAC GCCAACTGGC TGGCGCGCGT CAACCTGCTC
CATGCCTTCG CGCAGAACGA CGTGAGCGGT GTCGAGACGA CAACTCCCGG CTACAACCGG
CTGCGGGCCG AGGTCAGCTA CACGACCACT CTGCCGAAGA ACGATTGGTG GGGAGCACAG
AAGGTGACGG TCGGTCTCGT CGGCGACAAT CTGCTGAACG AGGACATCCG CAACGCCGTC
GCCTACAACA AGGATCAGGT GTTGCTGCCA GGGCTAAACG TGCGGCTGTT CGCGAACGTC
AAATACTGA
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| Protein sequence | MSVPSNRFLA IARLGVVSLP VLGVMAMPDE ISAQTALPGI VVNAPSPIVH RARPHQARPA
RTVRRGTTTR PSAAPQPEVA SAPTPPSPPP ANLPGTLPIV TDQFATVTVV PSDEIRRNGA
ATLGDLLNNK PGITGSSFAP GASSRPIIRG LDVNRVGIVE NGIGSNGASD LGEDHFVPID
PLSTNQVEVI RGPATLRYGS TAIGGVVSAS NNRIPETSPC APPLTTQTYG YAVKAPQLST
PPGCVNFETR GALSSVDNGR EGGVLLDAGG GGFAIHADAF ARRTEDYAIP GGVQKNTATD
SNGGSVGGSY LFDGGFVGAA ITQNNSLYHI PGKEGEEFGT RIDAHQTKFT AKGEYRPDAA
AIDAIRFWLG ATDYKHNELG LADAADLSSD GVRQTFTNKE QEGRMEVQLA PFNLRFAALT
TAIGVQASHQ ELTAPGPSDP FSPLNGLWDP NSNGRLAGYI FNEFKFSDTT KAQVAGRIEH
VNLNGSTPSV IPELFDLAAD PGAIGVATPR ALNFTPASAS VGLIQNLPWN LVASLTGQYV
ERAPKPAELF SRGAHDATET FDIGSPNLGI ETAKSVEAGL RRATGPLRFE LTGYYTRFNG
FIYRRLTGNT CDETACAAGP GLELNQAIYS QTDATFRGGE FQFQYDVLPI WNGLFGIEGQ
YDIVRATFTD GTNVPRIPPQ RAGGGVYYHD ANWLARVNLL HAFAQNDVSG VETTTPGYNR
LRAEVSYTTT LPKNDWWGAQ KVTVGLVGDN LLNEDIRNAV AYNKDQVLLP GLNVRLFANV
KY
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