Gene Nham_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3241 
Symbol 
ID4031903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3574130 
End bp3574657 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID637971654 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_578436 
Protein GI92118707 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACAT CGTCTTCGGC AGGACAAAGC CGCCGTGATT TCCTTTTTGT AGCAACCGGC 
GCCGTCGCCG CCGTCGGCGC GGCTGCTGCT GCGTGGCCGC TGGTGGCTCA GCTGAATCCG 
GATGCCTCCA CGATCGCCGC CGGCGCGCCC ATCGAGGTCG ATCTCGCTCC GATCGCCGAA 
GGGCAGGACA TCAAGGTGTT CTGGCGCGGC AAGCCGATCT TCATCAGCCA CCGCACCAAG 
AAGCAGATCG AGGACGCCCG TAACGTCAAT GTCGCAAGCC TGCCCGATCC GGCGAGCGAC 
CAGTCGCGCG TCAAGGAAGG TCATGACCAG TGGCTCGTCG TGATCGGCAT CTGCACCCAC 
CTCGGCTGCG TCCCGATCGC CCATGAGGGC GCCTATGACG GCTTCTTCTG TCCCTGCCAC 
GGCTCGGTGT ACGACACCTC CGGCCGTATC CGCCAGGGGC CTGCGCCGCT CAATCTTCCC 
GTCCCGCCTT ACGCCTTCGT GTCCGACAGC AAGATCAAGA TCGGATAA
 
Protein sequence
MTTSSSAGQS RRDFLFVATG AVAAVGAAAA AWPLVAQLNP DASTIAAGAP IEVDLAPIAE 
GQDIKVFWRG KPIFISHRTK KQIEDARNVN VASLPDPASD QSRVKEGHDQ WLVVIGICTH 
LGCVPIAHEG AYDGFFCPCH GSVYDTSGRI RQGPAPLNLP VPPYAFVSDS KIKIG