| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3213 |
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| Symbol | |
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| ID | 4031992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3539184 |
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| End bp | 3540065 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971626 |
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| Product | peptidase S49 |
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| Protein accession | YP_578408 |
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| Protein GI | 92118679 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00577792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG GGACGAGAGC AGCGCTGATG AAACTGGTTC CCAAGCGATG GCGGTCCGGG
AAGCCGGTGG TGCCGGTGGT GCGGTTGTCC GGCGTGATCG GCGCGGTGAC GCCGCTCAGG
CCGGGCATGA CGCTTGCGGG CGTCGCCAAG ACGCTGGAGC GGGCGTTCGC GGTGGACAAT
GCCAAAGCGG TGGCGCTGCT GGTCAATTCG CCGGGCGGCT CGCCGGTGCA GTCGCGCCAG
ATTTTTCTGC GCATCCGGCA GCTCGCGCAG GAGAAAAAGC TTCCGGTGCT GGTGTTCGTC
GAGGACGTCG CCGCCTCCGG CGGCTATATG ATCGCCTGCG CAGGCGACGA GATTGTCTGC
GATCCCTCGT CGATCCTGGG TTCGATCGGC GTGGTCGGCG GCAGCTTCGG TTTCACCGAA
CTGATCGGGA AGATCGGCGT CGAGCGCAGG CTGTATACGG CGGGCGAACA CAAGGCGACG
CTCGATCCGT TCCTTCCCGA AAACCCCGAC GATGTGGCGC GGCTGAAAGC AATCCAGCGC
GAGATCCACG CCACCTTCAT CGAACTGGTC AAGACAAGCC GCGGTGCGCG GCTGAAGGGG
GAGGACGATC TTTTGTTCAC CGGCGAATAC TGGGCGGGCG AGCGATCGGT CGCACTCGGC
CTTGCGGACG CGATCGGCGA TCTCCGCTCG ACTCTGCGGG CGCGGTTCGG CGACAAGGTC
TTGATGCCGC TGATCGCGCC TTCGACCGGT CTCTTGGCGG GGCTGCTTGG CCGCAAAGCG
GGAGCCGGAA CCCTGACCTC GTTCGATGCC GCCCTGGGGT TGCCGGACGA CCTGATCTCC
GCGCTTGAGA CCCGGGCGAT TTGGGCCAAG TTCGGATTTT AG
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| Protein sequence | MSDGTRAALM KLVPKRWRSG KPVVPVVRLS GVIGAVTPLR PGMTLAGVAK TLERAFAVDN
AKAVALLVNS PGGSPVQSRQ IFLRIRQLAQ EKKLPVLVFV EDVAASGGYM IACAGDEIVC
DPSSILGSIG VVGGSFGFTE LIGKIGVERR LYTAGEHKAT LDPFLPENPD DVARLKAIQR
EIHATFIELV KTSRGARLKG EDDLLFTGEY WAGERSVALG LADAIGDLRS TLRARFGDKV
LMPLIAPSTG LLAGLLGRKA GAGTLTSFDA ALGLPDDLIS ALETRAIWAK FGF
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