| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3141 |
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| Symbol | |
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| ID | 4030329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3464304 |
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| End bp | 3465722 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971555 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_578337 |
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| Protein GI | 92118608 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.565795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTTG ACGCCCACCG GAGCGCGCTG TCGCGCGAAG CCTGGCTCGG AGAATTCCGG
GCGACGCTGA CGCTTGGTTG GCCGCTCGTT CTCACCAACC TCGCGCAAAT CGCGCTGACC
ACCACCGATG TGATCGTACT GGGCCGCGTT GGTCCTTCGG CGCTGGCCGC AGGAACCCTT
GGCGTCAATC TGTACCTCGC GATCCTGATT TTCGGCATCG GCGTCGTCAC TGCGGCGTCG
CCGATGATGG CCGAAGCGTT CGGTCGTAAA TTGCACATGG TGCGCGATGT GCGGCGGACG
TTCCGGCAGG GGCTATGGAC GGCGGTGCTG ATTGCGGTGC CGAGCTGGCT GCTGCTCTGG
CATACAGATG CAATCCTCAT TCTGCTCGAT CAGGAACCGC AGCTTGCAGC CGACGCCCAG
GTGTTCGTGC GCGCATTGCA ATGGGGCATG CTGCCGACTC TGGGTTTCAT TGCGCTGCGT
TCGTTCTTCG CCGCGCTGGA GCGCCCGGTA TGGGCGATGA TGGTGACCGC AGCCGCGATC
CTGTTCAATA TCGTGGCGAA CTGGGCGCTG GTGTTCGGTC ATCTCGGTCT GCCGGCACTG
GGGCTGCGAG GGTCCGGCAT CGCGACCACG TTGTCGAATA CCTTCCTGTT CGTCGGGCTG
GCGCTGGTGG TGAGCTTTGG CCGCAGGTTT CGTCGCTATC ATCTGTTCGG CAACTGGTGG
CGCGCCGATT GGCCATGTCT CGTCACGCTG TGGCGCGTTG GACTGCCGAT CGGCGCTGCG
CTTGCCTTCG AGATCACCGT GTTCAATGCC GCGGTGTTCC TGATGGGGCA GTTCGGCACG
GCCTCGATCG CGGCTCACGC CATTGCGATT CAGATCGCGT CGGTCTCCTT CATGGTGCCG
ATGGGACTGG CGCAGGCCGT AACGGTGCGC GTCGGTCGCG CTTACGGGGC CGGAGATCGC
GATGGGATCG CCCGCGCCGG GTGGGCGTCG TTGGCGCTGG CGATTGCTTT CATGACCAGC
ACCAGCGTGT TGATGATTAC TGCGCCGCGA TGGTTGATCG GCGCATTCGT CGACGTCAAC
GATGCAGCGA ATGTCGAGGT GATCGGGTTG GCCGTGTCGT TTCTGACCTG CGCGGCGGTG
TTTCAGATTG CCGACGGTGC ACAGGTGGTC GGCGCCGGTA TGCTGCGCGG CTTGCAGGAT
ACCCGCGTGC CGATGATCTA TGCCGGTCTT GGCTATTGGG GCTTCGGCAT GTCGCTGAGC
TTGCTGTTTG CCTTCAGGCT CGGATTTCAG GGCACCGGTA TCTGGATCGG CCTGGCGTCG
GGCCTCGCGG CCGTGGCCAT CCTGATGATC TCGCGCTGGA TCAGACGTGA GCGGCTCGGT
CTGGTGCCTC TAAAGGATAT GCGGTATCGC GAGGCCTAG
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| Protein sequence | MLFDAHRSAL SREAWLGEFR ATLTLGWPLV LTNLAQIALT TTDVIVLGRV GPSALAAGTL
GVNLYLAILI FGIGVVTAAS PMMAEAFGRK LHMVRDVRRT FRQGLWTAVL IAVPSWLLLW
HTDAILILLD QEPQLAADAQ VFVRALQWGM LPTLGFIALR SFFAALERPV WAMMVTAAAI
LFNIVANWAL VFGHLGLPAL GLRGSGIATT LSNTFLFVGL ALVVSFGRRF RRYHLFGNWW
RADWPCLVTL WRVGLPIGAA LAFEITVFNA AVFLMGQFGT ASIAAHAIAI QIASVSFMVP
MGLAQAVTVR VGRAYGAGDR DGIARAGWAS LALAIAFMTS TSVLMITAPR WLIGAFVDVN
DAANVEVIGL AVSFLTCAAV FQIADGAQVV GAGMLRGLQD TRVPMIYAGL GYWGFGMSLS
LLFAFRLGFQ GTGIWIGLAS GLAAVAILMI SRWIRRERLG LVPLKDMRYR EA
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