Gene Nham_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3101 
Symbol 
ID4029890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3422811 
End bp3423908 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID637971516 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_578298 
Protein GI92118569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTCA AGTGCGGTAT CGTCGGATTG CCCAATGTCG GCAAGTCGAC TCTGTTCAAC 
GCGCTGACGG AGACGGCGGC GGCGCAGGCT GCGAACTATC CGTTCTGCAC CATCGAGCCC
AATGTCGGCG CCGTGGCGGT GCCGGATCCG CGCCTTGACC AGCTCGCGGC GGTCGCCAAA
TCGGCGCAGA TCATTCCGAC GCAACTGACG TTTGTCGACA TCGCGGGTCT GGTGCGCGGC
GCATCCAAGG GTGAAGGCCT CGGCAACCAG TTTCTCGCCA ACATCCGCGA AGTCGATGCG
GTCGCCCATG TGGTGCGCTG TTTTGAAGAT TCCGACATCA CCCATGTCGA AGGCAAGATC
GCGCCGCTCG CGGATATCGA GACCATCGAG ACCGAGCTGA TGCTGGCCGA TCTCGACAGT
CTCGAGAAGC GTGTCGACAC CCTTTCGAAA AAGGCCAAGG GCAACGACAA GGAGGCCAAG
GAGCAGCTCG ATCTGGTCGA GCGTGCGCTC AAGCTGTTGC GCGAGGGCAA GCCGACGCGC
GGCATGGAGC GCAAGCCTGA GGAAGAGCGC AATTTCCGCA TGCTCGGACT ACTGACCTCA
AAGCCGGTGC TCTACGTCTG CAACGTCGAG GAGGGCTCGG CGGCTGGCGG CAACGCCTTC
TCGCAGGCGG TGTTCGACCA TGCGACCAAG GAAGGCGCGG TCGCGGTGGC GATTTCCGCG
AAGATCGAAT CCGAGATCGC GACGCTGTCG CGCGAGGAGC GCGCTGATTT TCTCGATACG
CTGGGGCTGG AAGAGGCGGG TCTCGACCGG CTGATCCGCG CCGGCTACCG GTTGCTCGAT
CTCATCACCT ACTTCACGGT CGGCCCGAAG GAAGCGCGGG CATGGACCAT CACCCGCGGC
ACCAAGGCGC CGGCCGCGGC CGGCGTCATT CACACCGACT TTGAAAAAGG TTTCATCCGC
GCCGAAACCA TCGCTTACGC CGATTATGCG GCGCTCGGCG GCGAGGCCGG TGCGCGCGAT
GCCGGCAAGC TGCGGCTGGA AGGAAAGGAG TATGTGGTCG CCGACGGCGA CGTCATGCAT
TTCAGGTTCA ATACTTAG
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTETAAAQA ANYPFCTIEP NVGAVAVPDP RLDQLAAVAK 
SAQIIPTQLT FVDIAGLVRG ASKGEGLGNQ FLANIREVDA VAHVVRCFED SDITHVEGKI
APLADIETIE TELMLADLDS LEKRVDTLSK KAKGNDKEAK EQLDLVERAL KLLREGKPTR
GMERKPEEER NFRMLGLLTS KPVLYVCNVE EGSAAGGNAF SQAVFDHATK EGAVAVAISA
KIESEIATLS REERADFLDT LGLEEAGLDR LIRAGYRLLD LITYFTVGPK EARAWTITRG
TKAPAAAGVI HTDFEKGFIR AETIAYADYA ALGGEAGARD AGKLRLEGKE YVVADGDVMH
FRFNT