Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3035 |
Symbol | |
ID | 4032164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3345650 |
End bp | 3346789 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637971459 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_578241 |
Protein GI | 92118512 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.181015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTCCTA TCGCATTGCC AATTCTCGAT GGTGAAGAAG GCGAAGCTGC CCGTCGGACG GTTTTGTCGG GCTGGTTGTC GCAGGGGCCG CAAGTCGCGG CATTCGAGCA TGAGTTCGCC GCGTTGGTGG GGGCATCGTA TGCCTGCGCG GTCTCTAACT GCACGGCCGC TCTGCATCTC GCATTGCGCG CTATCGGCGT CGGTCCGGGC GACGAAGTGG TGACAGCGAG CCACTCCTTC ATCGCGAGCG CCAACAGCAT TCGCTATTGC GGAGCGACGC CGGTGTTCGT CGATATCGAC CCATCGACCT ACAATCTCGA CCCGGAGCGG GTGGCAGAAG CGATCACTGA GCGAACGCGA GCTATCCTCG TCGTTCACCA GATGGGAATG CCTTGCGATC TTGCCGCTTT AAAGGCATTG GCGGATCGTC ATCAAATTTC CCTGATCGAG GACGCGGCCT GTGCCGCGGG CAGCCAGATT CGCATCGATG GGCTATGGGA TTGGATCGGC AAACCGCATG GGCAGATCGC GTGCTTCTCC TTTCATCCTC GCAAGGTCAT CACGACAGGG GAGGGTGGAA TGATGGCGAC TGGTAGCGTG GATCTTGACC AAAAATTCAA GCTGCTCCGT CAGCATGGCA TGAGCGTGCC CGACACGGTC AGGCATGGTT CGCAGCAGGT GATTTTCGAG GACTATCTGG AGGTCGGATT CAACTACCGG ATGACCGATA TGCAGGCAGC GATCGGGCGA AAGCAGCTCG AGCGGCTGAC AGATATCGTG TCGCGCCGTC GCGCTCTTGC TGGGCTTTAT GCCGAGCTGC TCGGCAACAT CGAAGGGCTC AGTCTGCCGT TTGAGCCGGA ATGGGCACGC TCCAACTGGC AAAGCTATTG CGTGCGGCTG CCGGATCGCG TCGATCAGAG GGCGGTGATG CAGAGCTTGC TTGATCAGGG TATCGCAACC CGCCGCGGGA TCATGTGTGC CCATCGTGAG GTGCCTTACG CCCACGAAAA GCAGCGCCAT GATCTGTGTC AGTCGGAATT GGCGCAGGAT CGCTCGATCC TGCTTCCGAT CTATGCGCAA ATGGTCGAGG AGGACCAGGT TCGCGTCGCC GATGCACTTA AGGCGACGTT ACGGAACTGA
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Protein sequence | MIPIALPILD GEEGEAARRT VLSGWLSQGP QVAAFEHEFA ALVGASYACA VSNCTAALHL ALRAIGVGPG DEVVTASHSF IASANSIRYC GATPVFVDID PSTYNLDPER VAEAITERTR AILVVHQMGM PCDLAALKAL ADRHQISLIE DAACAAGSQI RIDGLWDWIG KPHGQIACFS FHPRKVITTG EGGMMATGSV DLDQKFKLLR QHGMSVPDTV RHGSQQVIFE DYLEVGFNYR MTDMQAAIGR KQLERLTDIV SRRRALAGLY AELLGNIEGL SLPFEPEWAR SNWQSYCVRL PDRVDQRAVM QSLLDQGIAT RRGIMCAHRE VPYAHEKQRH DLCQSELAQD RSILLPIYAQ MVEEDQVRVA DALKATLRN
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