| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2859 |
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| Symbol | |
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| ID | 4029415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3149758 |
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| End bp | 3150552 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971302 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_578087 |
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| Protein GI | 92118358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCGG CAATATCGGC AGAGCCGAAA GGGGAAGCCA TCGCACTCGA TATCGTTTAC
GAGGACGACG ATCTGATCGT CGTCAACAAG CCGAAGGGGC TGGTCGTCCA CCCCGCGGCT
GGCCACGAGG CCGGGACGCT GGTCAACGCC CTCATTGCGC ATTGCGGGGG AAGCCTGTCC
GGCATTGGCG GCGTCTGCCG CCCCGGCATC GTGCATCGGC TCGACAAGGA CACTACCGGA
CTCATGGTCG CTGCCAAGAA CGACGCCGCG CACAAGTCGC TGAGCGCGCA ATTCGCGGAT
CACGGACGCA CCGGCGCGTT GCGACGGGGC TATCTGGCTT TTGCCTGGGG ACTGCCGAAC
CGCCCGCACG GTACCGTGGA CGCCCCGATC GACCGCCACC CTTATGCCCG CGAGAAAATG
GCCGTGCGCG CAAGCGGGCG CGAAGCGATC ACCCACTGGG AGGTGCGAAA GGCCTTCAAC
GGCCGAGACG GCAAACCGGT CGCTGCCCTC CTCGCCTGCC AACTTGAGAC CGGTCGCACC
CATCAGATCC GGGTACACCT CGCCCATGCC GGCCACCCCT TGATGGGCGA CGGCGTCTAT
GGCCCGCACT TCAAAACCAA GGCCAATCAG CTTGGACCTT CGGCCCGGAC CGCCCTCGAC
GCCCTCGGGC GGCAGGCGCT GCACGCATAT CTCCTGGCCA TCGAGCATCC CAGGACCGGA
GAAATTCTGC GTTGGGAAGC AGCGCTGCCG GAGGATTTAC TTCTGCTTCA GACGGCTTTG
GCGGCGACGG AATGA
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| Protein sequence | MPPAISAEPK GEAIALDIVY EDDDLIVVNK PKGLVVHPAA GHEAGTLVNA LIAHCGGSLS
GIGGVCRPGI VHRLDKDTTG LMVAAKNDAA HKSLSAQFAD HGRTGALRRG YLAFAWGLPN
RPHGTVDAPI DRHPYAREKM AVRASGREAI THWEVRKAFN GRDGKPVAAL LACQLETGRT
HQIRVHLAHA GHPLMGDGVY GPHFKTKANQ LGPSARTALD ALGRQALHAY LLAIEHPRTG
EILRWEAALP EDLLLLQTAL AATE
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