Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2809 |
Symbol | |
ID | 4030646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3094598 |
End bp | 3096475 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637971254 |
Product | ABC transporter related |
Protein accession | YP_578040 |
Protein GI | 92118311 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.194078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAC AGCGCCCCCT CGTCATCGAG ACCCTCACGG CTCTCGGCCT GATCCTTGCG CCGTTCATCC TGCCGCATCT CGGCTTCGCG CCGAACACCA TCAACCGCAT CCTGGTGTGG GGGCTGTTCG GCATCGGATT CGATATCCTG TTCGGCTTCA CCGGGCTGCT GTCGTTCGGC CAGTCGGCGT TCTACGGCAC CGGCGGCTTC GTGGCGGCCT ATCTGTTGAC CCAGGCGGGA TTCCCGCATG TGGTGACGTC GCTGTTCATC GGCATGATCG CGTCTGCGGC GGTCGGCTAT CTGGTCGGGC TGATCGCGTT GCGCCGCACC GGCATCTATT TCGCGATGAT TACGGTGGCG ATCGCGGAGG TATTCTTCTT CGTCGAGTTC AATCCGCTGG CCGATTGGAC CGGCGGCGAG AACGGCCTGC CCGGCGTGCC GACGCCGCAT TTCGATCTCG GATTCGCCGA CTTCCAGTTC AATACGAGCT GGTCGCTCTA TGTCTTCCTC GCCTTCTGGT ATTTCCTCGG CATCGTCGTG GGGCTGCGCA TCGTGCGCTC GCCGGTCGGC ACGATCCTGC GGGCGGTTCG CGAGAACCCG ATGCGGGCGT CGGCGGTCGG CCACAACATC CATTCCTACA AGCTGACCGC ATTCGTCATC GCCGCCGCCT ATGCGGGCTT CGCCGGCGGT CTGCTCGGCG TGATGCAGGC GTTCATGCCG CCCGACGCCT TCATGTTCCA CACCTCGGCC GAACTCGTCA TGATGACGGC CATCGGCGGC ACAGGCACCT TGTTCGGCAC GCTGGTCGGA GCCGGAGTCT GGCTGTTTCT GCAGGACTTC CTGCAGGCCG CGCTCGGTCT CGGAGCGGCG TGGAAGCTGG TGCTGGGTGT CGTGTTCGTG CTGCTGGTGT GTTTCCTGCG GCACGGCATC ATCGGCGGCA TCGCTGATCT TTACCGCCTT GCCGTCGGCA AGCGCGCCCA CCGGGAGCCG GTCGCGGCGC CGGCCAGCGC TTTGACCGCG GAGGAAGAAC AAGAGGTTGC GGAGGCCGAG CTCGCGAAGG AGCCGGATCC GTTTCCGATG GCCCCGGTGC ATCGCGCGAG CGACGGCTAT TCCGGCCCGA TCCTGCAGGC GACCGGCCTG ACCAAGCGTT ACGGCGGTCT CCTCGCCAAT AGCAAGATCG ATTTCACCGT CAACCATGGC GAGTTGCGCG GCATCATCGG CCCAAACGGC GCCGGCAAGT CGACGTTTTT CAAGATGTTG ACCTGCGAAG TCGCGCCGAC GTCGGGCAAG ATCGTGTTCG AGGGGCTCGA TATCACCGGG ATGAACGTCA CCGACGTCTG CCAGCTCGGT CTGACTAAAA GCTATCAGGT CAATCAGTTG TTCTCCGCAC TGACCGTGCG CGAGAATCTG ACCATCGCGG CGCTCTCGGA ATTGCGCGGC AAGTTCCGCC TCGACATATT CCGCAGTCTC GGCAACATTC CGGGATTATC CGAGCAGGTC CAACGCACGC TGGAACTGGT CAATCTGACG ACGCGGCCGG ACACGCCGGT GTCCGAACTC GCCTATGGCG AAAAGCGCCG GCTGGAAATC GGGCTGGCGC TGGCCACCTC GCCAAGCCTG CTGCTGCTCG ACGAGCCGCT CGCCGGCATG AGCCCGCGTG AGCGCGTGGA GACGGTCAAG CTGCTGAAGT CCATCAGCAA GGGCCGCACC ATGATCATCA TCGATCACGA CATGGATGCG CTGTTCGAAC TTGCCGAGCG CGTCACGGTG CTGCAGGAAG GCCGGGTGCT GGTCGAGGGA ACGCCGGACG AAATCAAGAA CAACGCTGCG GTCCAGGAGG CCTATCTCGG AGGTGTAAAC GGAGTGCTCA CCGCATGA
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Protein sequence | MLKQRPLVIE TLTALGLILA PFILPHLGFA PNTINRILVW GLFGIGFDIL FGFTGLLSFG QSAFYGTGGF VAAYLLTQAG FPHVVTSLFI GMIASAAVGY LVGLIALRRT GIYFAMITVA IAEVFFFVEF NPLADWTGGE NGLPGVPTPH FDLGFADFQF NTSWSLYVFL AFWYFLGIVV GLRIVRSPVG TILRAVRENP MRASAVGHNI HSYKLTAFVI AAAYAGFAGG LLGVMQAFMP PDAFMFHTSA ELVMMTAIGG TGTLFGTLVG AGVWLFLQDF LQAALGLGAA WKLVLGVVFV LLVCFLRHGI IGGIADLYRL AVGKRAHREP VAAPASALTA EEEQEVAEAE LAKEPDPFPM APVHRASDGY SGPILQATGL TKRYGGLLAN SKIDFTVNHG ELRGIIGPNG AGKSTFFKML TCEVAPTSGK IVFEGLDITG MNVTDVCQLG LTKSYQVNQL FSALTVRENL TIAALSELRG KFRLDIFRSL GNIPGLSEQV QRTLELVNLT TRPDTPVSEL AYGEKRRLEI GLALATSPSL LLLDEPLAGM SPRERVETVK LLKSISKGRT MIIIDHDMDA LFELAERVTV LQEGRVLVEG TPDEIKNNAA VQEAYLGGVN GVLTA
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