| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2792 |
|---|
| Symbol | |
|---|
| ID | 4031050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3078099 |
|---|
| End bp | 3078548 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637971240 |
|---|
| Product | IS66 Orf2 like |
|---|
| Protein accession | YP_578026 |
|---|
| Protein GI | 92118297 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0836026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCG GTTTCATTTC GGAACGGTGG CCGGCTTCAT GTCGGAACAG TGGCCGGCTT
CAAATCGGAA TACCCGGCCG GAATAAATCG GAATCCGCAT TCAGACTGGG CGCTGACCTG
CAGGTCTATC TGCACCGTGA GCCGATCGAC TTCCGGGCTG GCATCAACAG CCTTGCGGTT
CTGGTCCAGG AGACGATGGC GCTCGATCCG TTTGCTTCGG CGGTTTTTGC GTTCTGCAAT
CGCCGTTGCG ACCGGATGAA GTTGCTGTTC TTCGACCGAT CCGGCTTTGT GCTGGTCCTG
AAGCGGCTGA GCGAGGACAA GTTCCGATGG CCGCGCCGCC AAGAGGCGGT CGTCACGCTT
ACCACCGAGC AATTGCACTG GATCCTCGAC GGCATCGATA TCGATGCGAT GGTCCGCCAT
CCGGTGCGGC AATATCAGGT TGCCGGCTGA
|
|---|
| Protein sequence | MPAGFISERW PASCRNSGRL QIGIPGRNKS ESAFRLGADL QVYLHREPID FRAGINSLAV
LVQETMALDP FASAVFAFCN RRCDRMKLLF FDRSGFVLVL KRLSEDKFRW PRRQEAVVTL
TTEQLHWILD GIDIDAMVRH PVRQYQVAG
|
|---|
| |